RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 DLDP09622 509 aaKnown RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 SRCP12931 536 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 RECQLP46063 649 aaPredicted RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 RPL21P46778 160 aaKnown RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 SCNN1BP51168 640 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 SLC20A2Q08357 652 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 GRSF1Q12849 480 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHD8-204ENST00000553622 CALCOCO2Q13137 446 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 HLTFQ14527 1009 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHD8-204ENST00000553622 NAA30Q147X3 362 aaPredicted RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 EIF4HQ15056 248 aaKnown RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 ELF2Q15723 593 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 MLF2Q15773 248 aaPredicted RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 PCSK7Q16549 785 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 SLC44A4Q53GD3 710 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 C22orf39Q6P5X5 142 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 C4orf22Q6V702 233 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 KIAA0907Q7Z7F0 614 aaPredicted RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 METTL3Q86U44 580 aaKnown RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 SUGP1Q8IWZ8 645 aaKnown RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 IFT20Q8IY31 132 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 PHTF2Q8N3S3 785 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 PGBD5Q8N414 524 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 SH2D3CQ8N5H7 860 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 TEX26Q8N6G2 289 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 CNTD1Q8N815 330 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 ZNF366Q8N895 744 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 TSEN2Q8NCE0 465 aaKnown RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 OR6K2Q8NGY2 324 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 CASKIN2Q8WXE0 1202 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 FAM3CQ92520 227 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 FATE1Q969F0 183 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 TTC17Q96AE7 1141 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 SNF8Q96H20 258 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 ZNF419Q96HQ0 510 aaPredicted RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 TEKT5Q96M29 485 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 SEMA3CQ99985 751 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 POLR1EQ9GZS1 481 aaKnown RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 ETNK1Q9HBU6 452 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 FBRSL1Q9HCM7 1045 aaKnown RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 TRPV5Q9NQA5 729 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 SLC2A4RGQ9NR83 387 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 DMGDHQ9UI17 866 aaKnown RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 SLCO3A1Q9UIG8 710 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 ANAPC5Q9UJX4 755 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 NDRG2Q9UN36 371 aaKnown RBP9.92□□□□□ -0.82
CHD8-204ENST00000553622 NEU2Q9Y3R4 380 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 XIRP2A4UGR9 3374 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 GOLGA6CA6NDK9 693 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 GOLGA6BA6NDN3 693 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 TTC34A8MYJ7 566 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 GOLGA8MH3BSY2 632 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 MUSKO15146 869 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 GJB3O75712 270 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 CD160O95971 181 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 EGFP01133 1207 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 APRTP07741 180 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 SRPRAP08240 638 aaKnown RBP9.91□□□□□ -0.82
CHD8-204ENST00000553622 GOLGA6DP0CG33 693 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 BMP1P13497 986 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 HLA-EP13747 358 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 CD72P21854 359 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 CD68P34810 354 aaPredicted RBP9.91□□□□□ -0.82
CHD8-204ENST00000553622 TIE1P35590 1138 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 FDFT1P37268 417 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 HSPA9P38646 679 aaKnown RBP9.91□□□□□ -0.82
CHD8-204ENST00000553622 CD86P42081 329 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 WASP42768 502 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 TNNT3P45378 269 aaPredicted RBP9.91□□□□□ -0.82
CHD8-204ENST00000553622 RGRP47804 291 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 ITGA8P53708 1063 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 SPARCL1Q14515 664 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 ZNF234Q14588 700 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 TRADDQ15628 312 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 DLG2Q15700 870 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 PARP6Q2NL67 630 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 INO80DQ53TQ3 878 aaPredicted RBP9.91□□□□□ -0.82
CHD8-204ENST00000553622 C2orf27AQ580R0 203 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 EMC10Q5UCC4 262 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 EGFLAMQ63HQ2 1017 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 SERPINA13PQ6UXR4 307 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 Q6ZVU0 165 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 KDELC2Q7Z4H8 507 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 ZNF513Q8N8E2 541 aaPredicted RBP9.91□□□□□ -0.82
CHD8-204ENST00000553622 BBOF1Q8ND07 529 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 IPMKQ8NFU5 416 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 MYRIPQ8NFW9 859 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 SPATA22Q8NHS9 363 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 GDAP1L1Q96MZ0 367 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 NECAB3Q96P71 396 aaPredicted RBP9.91□□□□□ -0.82
CHD8-204ENST00000553622 RBM15Q96T37 977 aaKnown RBP eCLIP9.91□□□□□ -0.82
CHD8-204ENST00000553622 MGME1Q9BQP7 344 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 MTG2Q9H4K7 406 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 FAM114A2Q9NRY5 505 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 GOLGA6AQ9NYA3 693 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 LHX3Q9UBR4 397 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 TPX2Q9ULW0 747 aaKnown RBP9.91□□□□□ -0.82
CHD8-204ENST00000553622 HS3ST2Q9Y278 367 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 ATP8A1Q9Y2Q0 1164 aa9.91□□□□□ -0.82
CHD8-204ENST00000553622 TARSL2A2RTX5 802 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms