RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ODF2Q5BJF6 829 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 JADE1Q6IE81 842 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 GLDNQ6ZMI3 551 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-208ENST00000553278 ZNF551Q7Z340 670 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-208ENST00000553278 GPAT4Q86UL3 456 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 RHPN2Q8IUC4 686 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 ARL10Q8N8L6 244 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 IL17RCQ8NAC3 791 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 FAM110DQ8TAY7 271 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-208ENST00000553278 RFKQ969G6 155 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 HS6ST2Q96MM7 605 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 RAB3IPQ96QF0 476 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-208ENST00000553278 FIZ1Q96SL8 496 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.06□□□□□ -1.44
SCFD1-208ENST00000553278 C2orf40Q9H1Z8 148 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 IKZF4Q9H2S9 585 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 ASAH2Q9NR71 780 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 ASNSD1Q9NWL6 643 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 OGFRQ9NZT2 677 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 MTRRQ9UBK8 725 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 TESQ9UGI8 421 aaKnown RBP6.06□□□□□ -1.44
SCFD1-208ENST00000553278 DTX4Q9Y2E6 619 aa6.06□□□□□ -1.44
SCFD1-208ENST00000553278 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.06□□□□□ -1.44
SCFD1-208ENST00000553278 LOC100509620A0A075B734 347 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 OR2A25A4D2G3 310 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 VWC2LB2RUY7 222 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 PRYO14603 147 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 HS6ST1O60243 411 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 SPDEFO95238 335 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 SLU7O95391 586 aaKnown RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 ATP5BP06576 529 aaKnown RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 HEXAP06865 529 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 CCDC175P0C221 793 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 ITPKBP27987 946 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 HOXA13P31271 388 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 CNR2P34972 360 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 PIP4K2AP48426 406 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 EFNA5P52803 228 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 COPB1P53618 953 aaKnown RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 GUCY1B3Q02153 619 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 OLIG2Q13516 323 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 BAATQ14032 418 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 PPP2R5BQ15173 497 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 ADIPOQQ15848 244 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 HIST2H2ACQ16777 129 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 TXNDC8Q6A555 127 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 KIAA0930Q6ICG6 404 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 DCLRE1AQ6PJP8 1040 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 GLB1LQ6UWU2 654 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 MOB3CQ70IA8 216 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 PLPPR4Q7Z2D5 763 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 BHLHE22Q8NFJ8 381 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 OR6J1Q8NGC5 347 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 SGCDQ92629 289 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 SIPA1Q96FS4 1042 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 CDHR1Q96JP9 859 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 OSGEPL1Q9H4B0 414 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 PFDN4Q9NQP4 134 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 DUSP22Q9NRW4 184 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 SELENONQ9NZV5 590 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 CLDN16Q9Y5I7 305 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 HEMK1Q9Y5R4 338 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 SIRT4Q9Y6E7 314 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-208ENST00000553278 DUSP10Q9Y6W6 482 aa6.05□□□□□ -1.44
SCFD1-208ENST00000553278 WDR27A2RRH5 827 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 UNC119BA6NIH7 251 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 QSOX1O00391 747 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 PEX1O43933 1283 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 FAM20BO75063 409 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 SLC25A12O75746 678 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 MTA2O94776 668 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 PLATP00750 562 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 IL1AP01583 271 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 TUBBP07437 444 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 RFPL3SP0C7P2 107 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 FCGR2AP12318 317 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 SLC2A4P14672 509 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 NDUFB7P17568 137 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 LAG3P18627 525 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 CDAP32320 146 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 BUD31P41223 144 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-208ENST00000553278 CAMPP49913 170 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 PMS2P54278 862 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 F2RL1P55085 397 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 DMWDQ09019 674 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 IKQ13123 557 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-208ENST00000553278 TOB2Q14106 344 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-208ENST00000553278 SEMA3AQ14563 771 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 MFSD13AQ14CX5 517 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 RNPS1Q15287 305 aaKnown RBP6.04□□□□□ -1.44
SCFD1-208ENST00000553278 ASTE1Q2TB18 679 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-208ENST00000553278 ZNF628Q5EBL2 1059 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 KAZNQ674X7 775 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 SERPINA13PQ6UXR4 307 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 MDGA2Q7Z553 956 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 KBTBD6Q86V97 674 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 METTL23Q86XA0 190 aa6.04□□□□□ -1.44
SCFD1-208ENST00000553278 ZBTB8BQ8NAP8 495 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms