RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 CPNE1Q99829 537 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 MRPL45Q9BRJ2 306 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 PRDM12Q9H4Q4 367 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 RUVBL2Q9Y230 463 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 TRIP12Q14669 1992 aaPredicted RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 KCNU1A8MYU2 1149 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 AP1G1O43747 822 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 TPST1O60507 370 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 ALDH1A2O94788 518 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 ZFXP17010 805 aaPredicted RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 AKAP5P24588 427 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 IGFBP6P24592 240 aaPredicted RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 PPARGP37231 505 aaPredicted RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 ITGA7Q13683 1181 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 USP10Q14694 798 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 INSCQ1MX18 579 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 MTX3Q5HYI7 312 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 GRTP1Q5TC63 336 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 DUS1LQ6P1R4 473 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 ZFP1Q6P2D0 407 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 RBM12BQ8IXT5 1001 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 RP9Q8TA86 221 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 KCNN1Q92952 543 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 ZMAT2Q96NC0 199 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 DPP3Q9NY33 737 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 BFARQ9NZS9 450 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 THEGQ9P2T0 379 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 RSL24D1Q9UHA3 163 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 MRPL42Q9Y6G3 142 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 C7orf72A4D263 438 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 BOLA2-SMG1P6H3BVE0 249 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 PDLIM1O00151 329 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 MDM4O15151 490 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 GPR32O75388 356 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 PIM1P11309 404 aaPredicted RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 CCDC130P13994 396 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 CKMT2P17540 419 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 MPP3Q13368 585 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 FAM219BQ5XKK7 198 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 C4orf22Q6V702 233 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 RNF135Q8IUD6 432 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 ZNF567Q8N184 647 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 TRIB2Q92519 343 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 KHSRPQ92945 711 aaKnown RBP eCLIP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 RBBP8Q99708 897 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 APBA2Q99767 749 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 RBM38Q9H0Z9 239 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 ADAMTS10Q9H324 1103 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 NOL11Q9H8H0 719 aaKnown RBP12.54□□□□□ -0.4
HDAC7-230ENST00000552960 CHRAC1Q9NRG0 131 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 SNTG2Q9NY99 539 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 KLK14Q9P0G3 267 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 CACNG4Q9UBN1 327 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 BLOC1S6Q9UL45 172 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 VANGL2Q9ULK5 521 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 AP4S1Q9Y587 144 aa12.54□□□□□ -0.4
HDAC7-230ENST00000552960 MATN2O00339 956 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 IL18RAPO95256 599 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 F2P00734 622 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 TFPTP0C1Z6 253 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 CYP2C9P11712 490 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 GLDCP23378 1020 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 LPIN1Q14693 890 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 MFSD10Q14728 455 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 DCAF6Q58WW2 860 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 STEAP4Q687X5 459 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 KLHL35Q6PF15 583 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 CXCL17Q6UXB2 119 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 CLVS1Q8IUQ0 354 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-230ENST00000552960 KCTD4Q8WVF5 259 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 WNT8BQ93098 351 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 ERLEC1Q96DZ1 483 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 PRMT7Q9NVM4 692 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-230ENST00000552960 RRN3Q9NYV6 651 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 CCDC167Q9P0B6 97 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 CEPT1Q9Y6K0 416 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 NUP205Q92621 2012 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 ZNF189O75820 626 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-230ENST00000552960 STAMBPO95630 424 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 HOXD8P13378 290 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-230ENST00000552960 HNRNPLP14866 589 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■■■■□ 20
HDAC7-230ENST00000552960 ALOX15P16050 662 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-230ENST00000552960 PRDX6P30041 224 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 NR2C2P49116 596 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 PITX1P78337 314 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-230ENST00000552960 MGAT5BQ3V5L5 792 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 PITRM1Q5JRX3 1037 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 RPS27LQ71UM5 84 aaKnown RBP12.53□□□□□ -0.4
HDAC7-230ENST00000552960 RNF168Q8IYW5 571 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-230ENST00000552960 PGAM4Q8N0Y7 254 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 HAUS8Q9BT25 410 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 DPEP3Q9H4B8 488 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 NXF3Q9H4D5 531 aaKnown RBP12.53□□□□□ -0.4
HDAC7-230ENST00000552960 ZNF696Q9H7X3 374 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 DOLKQ9UPQ8 538 aa12.53□□□□□ -0.4
HDAC7-230ENST00000552960 ELNP15502 786 aa12.52□□□□□ -0.4
HDAC7-230ENST00000552960 HTRA3P83110 453 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms