RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TAS2R40P59535 323 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 SLC25A11Q02978 314 aaKnown RBP11.65□□□□□ -0.54
TMEM116-218ENST00000552839 C19orf57Q0VDD7 668 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 ZNF177Q13360 481 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-218ENST00000552839 ENPP2Q13822 863 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 STARD3Q14849 445 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 PDK2Q15119 407 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 RPS6KA1Q15418 735 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 SEL1L2Q5TEA6 688 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 LRRC38Q5VT99 294 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 NADSYN1Q6IA69 706 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 FBXL22Q6P050 247 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 BNIPLQ7Z465 357 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 TFAP2DQ7Z6R9 452 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 TMPRSS6Q8IU80 811 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 SIPA1Q96FS4 1042 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 C1orf74Q96LT6 269 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 PEBP4Q96S96 227 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 KCTD15Q96SI1 283 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-218ENST00000552839 IRX2Q9BZI1 471 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-218ENST00000552839 OSBPL2Q9H1P3 480 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 THAP10Q9P2Z0 257 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-218ENST00000552839 SALL4Q9UJQ4 1053 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 ZKSCAN5Q9Y2L8 839 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 SNX10Q9Y5X0 201 aa11.65□□□□□ -0.54
TMEM116-218ENST00000552839 MUC22E2RYF6 1773 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-218ENST00000552839 CLDN11O75508 207 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 C1QL1O75973 258 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 LUC7L3O95232 432 aaKnown RBP11.64□□□□□ -0.55
TMEM116-218ENST00000552839 IGLV3-19P01714 112 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 TCF4P15884 667 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 IL1R2P27930 398 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 OXTRP30559 389 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 SLC6A4P31645 630 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 L1CAMP32004 1257 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 SERPINB6P35237 376 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 ABCG1P45844 678 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 COPAP53621 1224 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 CDH4P55283 916 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 OXCT1P55809 520 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 RWDD2BP57060 319 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 GNG11P61952 73 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 RPS24P62847 133 aaKnown RBP11.64□□□□□ -0.55
TMEM116-218ENST00000552839 SMAD1Q15797 465 aaKnown RBP11.64□□□□□ -0.55
TMEM116-218ENST00000552839 PTPRNQ16849 979 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 GEN1Q17RS7 908 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 FAM133BQ5BKY9 247 aaKnown RBP11.64□□□□□ -0.55
TMEM116-218ENST00000552839 C6orf118Q5T5N4 469 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 CIR1Q86X95 450 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-218ENST00000552839 CPNE8Q86YQ8 564 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 RFX6Q8HWS3 928 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 CFAP52Q8N1V2 620 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 PYROXD2Q8N2H3 581 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
TMEM116-218ENST00000552839 UBE2Q2Q8WVN8 375 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 PRCCQ92733 491 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-218ENST00000552839 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 UBL7Q96S82 380 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-218ENST00000552839 MUC3BQ9H195 1237 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 STOML2Q9UJZ1 356 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 SLC27A6Q9Y2P4 619 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 SNX11Q9Y5W9 270 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 BPTFQ12830 3046 aa11.64□□□□□ -0.55
TMEM116-218ENST00000552839 GCN1Q92616 2671 aaKnown RBP11.63□□□□□ -0.55
TMEM116-218ENST00000552839 USP27XA6NNY8 438 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 KCNK3O14649 394 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 NPC1O15118 1278 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 TNFSF14O43557 240 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 LRIG2O94898 1065 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 ZRANB2O95218 330 aaKnown RBP eCLIP11.63□□□□□ -0.55
TMEM116-218ENST00000552839 GOT1P17174 413 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 CTNNA2P26232 953 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 ITPKBP27987 946 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 CTNNA1P35221 906 aaKnown RBP11.63□□□□□ -0.55
TMEM116-218ENST00000552839 EIF4EBP2Q13542 120 aaPredicted RBP11.63□□□□□ -0.55
TMEM116-218ENST00000552839 ZNF234Q14588 700 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 SUZ12Q15022 739 aaKnown RBP11.63□□□□□ -0.55
TMEM116-218ENST00000552839 DPYSL2Q16555 572 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 CA9Q16790 459 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 KIF19Q2TAC6 998 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 CCDC157Q569K6 752 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 FYB2Q5VWT5 728 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 RNF219Q5W0B1 726 aaPredicted RBP11.63□□□□□ -0.55
TMEM116-218ENST00000552839 KAZNQ674X7 775 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 TMCO3Q6UWJ1 677 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 RFX8Q6ZV50 586 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 CHST9Q7L1S5 443 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 ANKS1BQ7Z6G8 1248 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 FAM124AQ86V42 546 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 CACUL1Q86Y37 369 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 REXO1L1PQ8IX06 675 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 FAM217AQ8IXS0 508 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 SLC35F6Q8N357 371 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 ARFGAP1Q8N6T3 406 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 LRRC57Q8N9N7 239 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 PIP4K2CQ8TBX8 421 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 SLC39A7Q92504 469 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
TMEM116-218ENST00000552839 PRICKLE1Q96MT3 831 aaPredicted RBP11.63□□□□□ -0.55
TMEM116-218ENST00000552839 ZNF670Q9BS34 389 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms