RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 LEMD2Q8NC56 503 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 TTC8Q8TAM2 541 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 UHMK1Q8TAS1 419 aaKnown RBP5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 NDRG1Q92597 394 aaKnown RBP5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 MRPS31Q92665 395 aaKnown RBP5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 SMARCD2Q92925 531 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 SECISBP2LQ93073 1101 aaKnown RBP5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 RELTQ969Z4 430 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 ZFYVE19Q96K21 471 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 MYCBPQ99417 103 aaPredicted RBP5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 HNRNPABQ99729 332 aaKnown RBP5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 NCAPGQ9BPX3 1015 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 DUSP16Q9BY84 665 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 GPR88Q9GZN0 384 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 NAT10Q9H0A0 1025 aaKnown RBP5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 OSBPL2Q9H1P3 480 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 FAM207AQ9NSI2 230 aaPredicted RBP5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 PSD3Q9NYI0 1048 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 GDE1Q9NZC3 331 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 LIMA1Q9UHB6 759 aaKnown RBP5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 CHORDC1Q9UHD1 332 aaPredicted RBP5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 DNAJC12Q9UKB3 198 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 TSPAN16Q9UKR8 245 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 CA14Q9ULX7 337 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 SORCS3Q9UPU3 1222 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 TECTAO75443 2155 aa5.84□□□□□ -1.47
SMARCC2-213ENST00000552627 KMT2EQ8IZD2 1858 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 TRAV19A0A0A6YYK7 116 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 GTPBP10A4D1E9 387 aaKnown RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ZNF840PA6NDX5 716 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 TMEM221A6NGB7 291 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 LGALS16A8MUM7 142 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 HEPACAM2A8MVW5 462 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 M0QYV0 167 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 M0R296 226 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 FOXN3O00409 490 aaPredicted RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 MDM4O15151 490 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 TEX33O43247 280 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 THAP12O43422 761 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 KIF1CO43896 1103 aaKnown RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 FGF19O95750 216 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 CKMP06732 381 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 VDRP11473 427 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ALADP13716 330 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 YWHAQP27348 245 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 MFAP3P55082 362 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 YWHAEP62258 255 aaKnown RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 GUCY1A3Q02108 690 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 UBXN1Q04323 297 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 RAPGEF1Q13905 1077 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 FKBP15Q5T1M5 1219 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ICE2Q659A1 982 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ARHGAP17Q68EM7 881 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 MTSS1LQ765P7 747 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 PIGZQ86VD9 579 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 MON1AQ86VX9 555 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ZNF761Q86XN6 746 aaPredicted RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 CMTM8Q8IZV2 173 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 TTC39CQ8N584 583 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ANKRD52Q8NB46 1076 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 MNS1Q8NEH6 495 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ADAMTS17Q8TE56 1095 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 THAP3Q8WTV1 239 aaPredicted RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 SHC3Q92529 594 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 EDAQ92838 391 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 USP13Q92995 863 aaPredicted RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 KISS1RQ969F8 398 aaPredicted RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 FBXO32Q969P5 355 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 FBXW5Q969U6 566 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ELSPBP1Q96BH3 223 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 FAXDC2Q96IV6 333 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 BPIFA3Q9BQP9 254 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 TACO1Q9BSH4 297 aaKnown RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 TTLL2Q9BWV7 592 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 GANQ9H2C0 597 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 TASP1Q9H6P5 420 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 NMUR1Q9HB89 426 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ZFP14Q9HCL3 533 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 CSNK1G1Q9HCP0 422 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 NLRC4Q9NPP4 1024 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 PLCB1Q9NQ66 1216 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ARGLU1Q9NWB6 273 aaPredicted RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 OSER1Q9NX31 292 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 SMPD4Q9NXE4 827 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 TRPM5Q9NZQ8 1165 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 IGSF9Q9P2J2 1179 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 UXTQ9UBK9 157 aaPredicted RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 CYTH4Q9UIA0 394 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 DUSP12Q9UNI6 340 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 SIK3Q9Y2K2 1263 aa5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 ZFP37Q9Y6Q3 630 aaPredicted RBP5.83□□□□□ -1.48
SMARCC2-213ENST00000552627 XPO1O14980 1071 aaKnown RBP5.82□□□□□ -1.48
SMARCC2-213ENST00000552627 COCHO43405 550 aa5.82□□□□□ -1.48
SMARCC2-213ENST00000552627 NOBOXO60393 691 aa5.82□□□□□ -1.48
SMARCC2-213ENST00000552627 ECI2O75521 394 aa5.82□□□□□ -1.48
SMARCC2-213ENST00000552627 RTN3O95197 1032 aaPredicted RBP5.82□□□□□ -1.48
SMARCC2-213ENST00000552627 TBX18O95935 607 aa5.82□□□□□ -1.48
SMARCC2-213ENST00000552627 LTFP02788 710 aa5.82□□□□□ -1.48
SMARCC2-213ENST00000552627 IVLP07476 585 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms