RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 NPHS2Q9NP85 383 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 SNX15Q9NRS6 342 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 TREX1Q9NSU2 369 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 TXNDC16Q9P2K2 825 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 CHKBQ9Y259 395 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 MTO1Q9Y2Z2 717 aaKnown RBP11.68□□□□□ -0.54
RAB5C-208ENST00000551338 SRCAPQ6ZRS2 3230 aa11.68□□□□□ -0.54
RAB5C-208ENST00000551338 SCN8AQ9UQD0 1980 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 CCDC195A0A1B0GUA6 201 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 H3BNC9 293 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 BIRC5O15392 142 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 PRAMEF11O60813 436 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 STC2O76061 302 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 GSRP00390 522 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 KLKB1P03952 638 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 PROCP04070 461 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 URODP06132 367 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 TROVE2P10155 538 aaKnown RBP eCLIP11.67□□□□□ -0.54
RAB5C-208ENST00000551338 NEFHP12036 1026 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 ARNTP27540 789 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 CD86P42081 329 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 RENBPP51606 427 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 BST1Q10588 318 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 OVGP1Q12889 678 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 BNIP1Q12981 228 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 MSLNQ13421 630 aaPredicted RBP11.67□□□□□ -0.54
RAB5C-208ENST00000551338 RAB33AQ14088 237 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 PCLAFQ15004 111 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 CHI3L2Q15782 390 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 PCSK7Q16549 785 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 INSCQ1MX18 579 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 PPM1JQ5JR12 505 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 TMCO4Q5TGY1 634 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 FYB2Q5VWT5 728 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 KIAA0930Q6ICG6 404 aaPredicted RBP11.67□□□□□ -0.54
RAB5C-208ENST00000551338 RFWD3Q6PCD5 774 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 NLRP9Q7RTR0 991 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 CNTN4Q8IWV2 1026 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 CFAP52Q8N1V2 620 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 OR52K2Q8NGK3 314 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 RAB3IL1Q8TBN0 382 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 E2F7Q96AV8 911 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 VPS39Q96JC1 886 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 RANBP9Q96S59 729 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 KLF16Q9BXK1 252 aaPredicted RBP11.67□□□□□ -0.54
RAB5C-208ENST00000551338 FSD1LQ9BXM9 530 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 MYLK2Q9H1R3 596 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 ATXN3LQ9H3M9 355 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 C11orf49Q9H6J7 331 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 CYP4F11Q9HBI6 524 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 NSMCE4AQ9NXX6 385 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 SPG21Q9NZD8 308 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 TRPM5Q9NZQ8 1165 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 TMEM216Q9P0N5 145 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 PCDH10Q9P2E7 1040 aa11.67□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF106Q9H2Y7 1883 aaKnown RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 TRIM43BA6NCK2 446 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 GOLGA8TH3BQL2 631 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 MUSKO15146 869 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 TIMM44O43615 452 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 SIN3BO75182 1162 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 TGDSO95455 350 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 CSF2RAP15509 400 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 TYK2P29597 1187 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 OR1E1P30953 314 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 CORO1AP31146 461 aaKnown RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ARCN1P48444 511 aaKnown RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 SGSHP51688 502 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 CDH4P55283 916 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 PDE1BQ01064 536 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 OCRLQ01968 901 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 BTG3Q14201 252 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 LBRQ14739 615 aaKnown RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 GRM3Q14832 879 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ARMC3Q5W041 872 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 FSTL4Q6MZW2 842 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ESRP1Q6NXG1 681 aaKnown RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 CLEC14AQ86T13 490 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 DDX53Q86TM3 631 aaKnown RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ZC3HC1Q86WB0 502 aaKnown RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF354CQ86Y25 554 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 NUDCD3Q8IVD9 361 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 PLD6Q8N2A8 252 aaKnown RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 SLC25A41Q8N5S1 370 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 GBP7Q8N8V2 638 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ACVR1CQ8NER5 493 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 OR7D4Q8NG98 312 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 NSMCE1Q8WV22 266 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 AUTS2Q8WXX7 1259 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ATP2A3Q93084 1043 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 TRIM43Q96BQ3 446 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ARMC5Q96C12 935 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ATXN7L3BQ96GX2 97 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 C7orf26Q96N11 449 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 GPR22Q99680 433 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 RHOJQ9H4E5 214 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 KCNK13Q9HB14 408 aa11.66□□□□□ -0.54
RAB5C-208ENST00000551338 ZNF334Q9HCZ1 680 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-208ENST00000551338 VPS45Q9NRW7 570 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms