RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 DHDHQ9UQ10 334 aa5.26□□□□□ -1.57
LIMA1-205ENST00000550592 COX11Q9Y6N1 276 aa5.26□□□□□ -1.57
LIMA1-205ENST00000550592 CDK13Q14004 1512 aaKnown RBP5.26□□□□□ -1.57
LIMA1-205ENST00000550592 ZNF518AQ6AHZ1 1483 aa5.26□□□□□ -1.57
LIMA1-205ENST00000550592 POLR1AO95602 1720 aaPredicted RBP5.26□□□□□ -1.57
LIMA1-205ENST00000550592 SYNMO15061 1565 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 NEURL4Q96JN8 1562 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 MROH2AA6NES4 1674 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 MST1RQ04912 1400 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 CYP2D7A0A087X1C5 515 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 WIPF3A6NGB9 483 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 TNFSF14O43557 240 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 AKAP8O43823 692 aaKnown RBP5.25□□□□□ -1.57
LIMA1-205ENST00000550592 DDAH2O95865 285 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 UBL4AP11441 157 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 BMP5P22003 454 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 ARL1P40616 181 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-205ENST00000550592 PTPN9P43378 593 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 CYP2J2P51589 502 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 FOXF2Q12947 444 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 STIM1Q13586 685 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 GALNT3Q14435 633 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 CCDC30Q5VVM6 783 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 TMEM268Q5VZI3 342 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 HAUS3Q68CZ6 603 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 LRIG3Q6UXM1 1119 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 NEK10Q6ZWH5 1172 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 TMTC3Q6ZXV5 915 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 DIS3L2Q8IYB7 885 aaKnown RBP5.25□□□□□ -1.57
LIMA1-205ENST00000550592 CPXM2Q8N436 756 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 PLD5Q8N7P1 536 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 HDAC7Q8WUI4 952 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 IGFBPL1Q8WX77 278 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 DPF1Q92782 380 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 CLMNQ96JQ2 1002 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 SORCS2Q96PQ0 1159 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 TEFMQ96QE5 360 aaKnown RBP5.25□□□□□ -1.57
LIMA1-205ENST00000550592 NR1H4Q96RI1 486 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-205ENST00000550592 LBHD1Q9BQE6 289 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-205ENST00000550592 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 ZNF304Q9HCX3 659 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 ATP8A2Q9NTI2 1148 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 TBC1D22BQ9NU19 505 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 TERF2IPQ9NYB0 399 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 GRHL1Q9NZI5 618 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 NLKQ9UBE8 527 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 FBXO9Q9UK97 447 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-205ENST00000550592 SARDHQ9UL12 918 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 CAMK2AQ9UQM7 478 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 DNMT1P26358 1616 aaKnown RBP5.25□□□□□ -1.57
LIMA1-205ENST00000550592 MED14O60244 1454 aa5.25□□□□□ -1.57
LIMA1-205ENST00000550592 PLCH2O75038 1416 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 FGD6Q6ZV73 1430 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 LRP6O75581 1613 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 A0A1W2PQM1 296 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 TARSL2A2RTX5 802 aaKnown RBP5.24□□□□□ -1.57
LIMA1-205ENST00000550592 PGPEP1LA6NFU8 196 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 CEP104O60308 925 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 NEURL1O76050 574 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 SERPINC1P01008 464 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 CD72P21854 359 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 BDNFP23560 247 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 CHMP24386 653 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 EFNB1P98172 346 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 KRT32Q14532 448 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 ATF7IPQ6VMQ6 1270 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 FAM57BQ71RH2 274 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 CYB5R4Q7L1T6 521 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 PRSS45Q7RTY3 260 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 RD3Q7Z3Z2 195 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 ADGRG3Q86Y34 549 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 WIPF2Q8TF74 440 aaPredicted RBP5.24□□□□□ -1.57
LIMA1-205ENST00000550592 MPHOSPH8Q99549 860 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 FAM118BQ9BPY3 351 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 IFT27Q9BW83 186 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 SEMA4CQ9C0C4 833 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 SLC25A18Q9H1K4 315 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 HIPK3Q9H422 1215 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 IL1RAPL1Q9NZN1 696 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 MPP6Q9NZW5 540 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 PEMTQ9UBM1 199 aa5.24□□□□□ -1.57
LIMA1-205ENST00000550592 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.23□□□□□ -1.57
LIMA1-205ENST00000550592 ADAP00813 363 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 PSMA4P25789 261 aaKnown RBP5.23□□□□□ -1.57
LIMA1-205ENST00000550592 CERS1P27544 350 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 BLKP51451 505 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 CYP4A11Q02928 519 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 SLC9C1Q4G0N8 1177 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 SLC9B1Q4ZJI4 515 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 ZNF667Q5HYK9 610 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 CEP78Q5JTW2 689 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 ISM2Q6H9L7 571 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 MIS18BP1Q6P0N0 1132 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 IL20RBQ6UXL0 311 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 PRIMA1Q86XR5 153 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 ADGRF4Q8IZF3 695 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 GHDCQ8N2G8 530 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 ANKRD52Q8NB46 1076 aa5.23□□□□□ -1.57
LIMA1-205ENST00000550592 C11orf65Q8NCR3 313 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms