RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 UNC93AQ86WB7 457 aa10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 PDSS2Q86YH6 399 aa10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 ZNF567Q8N184 647 aa10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 TCF12Q99081 682 aa10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 STRA6Q9BX79 667 aa10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 PCDHAC1Q9H158 963 aa10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 RHOJQ9H4E5 214 aa10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 ARHGEF4Q9NR80 690 aa10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 SLC38A7Q9NVC3 462 aa10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 ABI2Q9NYB9 513 aaPredicted RBP10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 MAFBQ9Y5Q3 323 aaPredicted RBP10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 SLC30A1Q9Y6M5 507 aa10.35□□□□□ -0.75
SMARCC2-209ENST00000550164 CCDC88AQ3V6T2 1871 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 TJP1Q07157 1748 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 MDM4O15151 490 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 ZBTB24O43167 697 aaPredicted RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 CLASP2O75122 1294 aaKnown RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 RFPL1O75677 317 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 HOXC6P09630 235 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 LTA4HP09960 611 aaKnown RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 CPB1P15086 417 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 WNT7BP56706 349 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 RAD51Q06609 339 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 MSLNQ13421 630 aaPredicted RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 DMC1Q14565 340 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 NR6A1Q15406 480 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 TIGD7Q6NT04 549 aaPredicted RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 SCIMPQ6UWF3 145 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 EFL1Q7Z2Z2 1120 aaKnown RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 P3H2Q8IVL5 708 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 FNDC5Q8NAU1 212 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 OR52K2Q8NGK3 314 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 CLEC4CQ8WTT0 213 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 OSCP1Q8WVF1 389 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 NRG4Q8WWG1 115 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 SIRPGQ9P1W8 387 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 TRMT6Q9UJA5 497 aaKnown RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 SPATA31A6Q5VVP1 1343 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 RRN3P2A6NIE6 340 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 SPTLC1O15269 473 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 NRP2O60462 931 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 MT-ND1P03886 318 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 KRT8P05787 483 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 IL5RAQ01344 420 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 TWF1Q12792 350 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 PITRM1Q5JRX3 1037 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 MARC1Q5VT66 337 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 TAS1R3Q7RTX0 852 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 ZCCHC7Q8N3Z6 543 aaKnown RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 TERB1Q8NA31 727 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 C18orf25Q96B23 403 aaPredicted RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 MRPL57Q9BQC6 102 aaKnown RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 NIFKQ9BYG3 293 aaKnown RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 COQ10BQ9H8M1 238 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 SEMA4BQ9NPR2 832 aaPredicted RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 CASTOR2A6NHX0 329 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 FAM159BA6NKW6 160 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 CFAP99D6REC4 459 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 TADA2AO75478 443 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 DLGAP3O95886 979 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 LGALS2P05162 132 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 PCNAP12004 261 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 CDH2P19022 906 aaPredicted RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 S100A5P33763 92 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 CCNG1P51959 295 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 IRF9Q00978 393 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 ZNF460Q14592 562 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 PLCL1Q15111 1095 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 PERM1Q5SV97 790 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 WSCD1Q658N2 575 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 PTRHD1Q6GMV3 140 aaKnown RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 PRMT9Q6P2P2 845 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 TTC30AQ86WT1 665 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 NT5DC4Q86YG4 428 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 EGFL6Q8IUX8 553 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 FBXO39Q8N4B4 442 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 PEBP4Q96S96 227 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 PRKD2Q9BZL6 878 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 BRD8Q9H0E9 1235 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 PALMDQ9NP74 551 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 ANAPC2Q9UJX6 822 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 BTRCQ9Y297 605 aa10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 MTF2Q9Y483 593 aaPredicted RBP10.34□□□□□ -0.75
SMARCC2-209ENST00000550164 MYO18AQ92614 2054 aaKnown RBP10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 MYOCOSA0A1B0GUC4 107 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 CCDC189A1A4V9 331 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 CCDC154A6NI56 674 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 SYNCRIPO60506 623 aaKnown RBP10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 MSCO60682 206 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 NPR3P17342 541 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 PSMB9P28065 219 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 ENPEPQ07075 957 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 KLHDC10Q6PID8 442 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 FAM126BQ8IXS8 530 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 PTGR2Q8N8N7 351 aaPredicted RBP10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 RDH11Q8TC12 318 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 TRPC4APQ8TEL6 797 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 FAM210AQ96ND0 272 aa10.33□□□□□ -0.76
SMARCC2-209ENST00000550164 LPIN3Q9BQK8 851 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms