RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 OR8D1Q8WZ84 308 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 SPATA13Q96N96 652 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 LGMNQ99538 433 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 MGME1Q9BQP7 344 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 AP1M1Q9BXS5 423 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 RAB17Q9H0T7 212 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 TBC1D17Q9HA65 648 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 PCDH9Q9HC56 1237 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 VPS45Q9NRW7 570 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 RBM22Q9NW64 420 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 SEPT10Q9P0V9 454 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 SCML1Q9UN30 329 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 NDRG2Q9UN36 371 aaKnown RBP9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 AAR2Q9Y312 384 aaKnown RBP9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 MFHAS1Q9Y4C4 1052 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 CKAP5Q14008 2032 aa9.93□□□□□ -0.82
SMARCD1-206ENST00000549274 TCRBV7S2A1N4TA0A589 114 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 KRBA1A5PL33 1030 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 FAM170BA6NMN3 283 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 ERI2A8K979 691 aaKnown RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 PRRT4C9JH25 899 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 C1QTNF3-AMACRE9PGA6 284 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 J3KR12 359 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 K7EQS6 105 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 SNAP91O60641 907 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 SOCS5O75159 536 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 ALDH1A2O94788 518 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 POP4O95707 220 aaKnown RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 EGFP01133 1207 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 PRNPP04156 253 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 SERPINF2P08697 491 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 TARSP26639 723 aaKnown RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 RBL1P28749 1068 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 KIR2DL1P43626 348 aaPredicted RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 SUOXP51687 545 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 CLCN5P51795 746 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 GEMP55040 296 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 SARNPP82979 210 aaKnown RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 CDK16Q00536 496 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 ZBTB16Q05516 673 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 PPP1R7Q15435 360 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 DLG2Q15700 870 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 PARP6Q2NL67 630 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 HNRNPA1L2Q32P51 320 aaKnown RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 TMEM215Q68D42 235 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 TXNDC11Q6PKC3 985 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 TRIM67Q6ZTA4 783 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 PID1Q7Z2X4 250 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 NDUFAF2Q8N183 169 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 BBOF1Q8ND07 529 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 OR2AP1Q8NGE2 309 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 HCAR2Q8TDS4 363 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 USP33Q8TEY7 942 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 C1orf54Q8WWF1 131 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 PPP1R16AQ96I34 528 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 TEKT5Q96M29 485 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 NUDCD1Q96RS6 583 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 SRPK1Q96SB4 655 aaKnown RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 GABRG3Q99928 467 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 HERPUD2Q9BSE4 406 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 CPEB1Q9BZB8 566 aaKnown RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 FAM129AQ9BZQ8 928 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 SLC25A51Q9H1U9 297 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 GBA3Q9H227 469 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 TMEM245Q9H330 911 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 ATP13A3Q9H7F0 1226 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 L2HGDHQ9H9P8 463 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 POLMQ9NP87 494 aaPredicted RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 SCUBE2Q9NQ36 999 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 SAE1Q9UBE0 346 aaPredicted RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 MMP17Q9ULZ9 603 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 R3HDM2Q9Y2K5 976 aaKnown RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 ATP8A1Q9Y2Q0 1164 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 UTP11Q9Y3A2 253 aaKnown RBP9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 SIT1Q9Y3P8 196 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 STON1Q9Y6Q2 735 aa9.92□□□□□ -0.82
SMARCD1-206ENST00000549274 MUC22E2RYF6 1773 aaPredicted RBP9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 WASH3PC4AMC7 463 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 KCNK1O00180 336 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 FANCGO15287 622 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 RNF40O75150 1001 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 MAP3K6O95382 1288 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 ADH1BP00325 375 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 IFNB1P01574 187 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 JCHAINP01591 159 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 EPHX1P07099 455 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 CHRNB1P11230 501 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 HOXB2P14652 356 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 PTPN3P26045 913 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 SERPINA4P29622 427 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 TIE1P35590 1138 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 DGKEP52429 567 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 POLR2LP62875 67 aaKnown RBP9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 DR1Q01658 176 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 ITKQ08881 620 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 MPP3Q13368 585 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 SNX1Q13596 522 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 PTPRNQ16849 979 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 CARD16Q5EG05 197 aa9.91□□□□□ -0.82
SMARCD1-206ENST00000549274 ANKRD20A2Q5SQ80 823 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms