RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

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Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 MAP7D3Q8IWC1 876 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 PCDH20Q8N6Y1 951 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 OSCP1Q8WVF1 389 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 TBC1D31Q96DN5 1066 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 DCBLD2Q96PD2 775 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 CARD6Q9BX69 1037 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 VPS16Q9H269 839 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 ALG13Q9NP73 1137 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 HMGXB4Q9UGU5 601 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 SARDHQ9UL12 918 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 AGAP1Q9UPQ3 857 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 FAM169AQ9Y6X4 670 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 TMEM150BA6NC51 233 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 GOLGA6CA6NDK9 693 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 GOLGA6BA6NDN3 693 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 TISP43B9A030 160 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ARHGAP33O14559 1287 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 CYP26A1O43174 497 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 UGDHO60701 494 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ADH1AP07327 375 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ENO2P09104 434 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 GOLGA6DP0CG33 693 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ZNF8P17098 575 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 LEPRP48357 1165 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 SERPINB9P50453 376 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 KIAA1024LP59773 190 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 TLE2Q04725 743 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ZRSR1Q15695 479 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 LRRC8EQ6NSJ5 796 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 RFX8Q6ZV50 586 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 DPPA4Q7L190 304 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ZBTB46Q86UZ6 589 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PPIL6Q8IXY8 311 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 UNC5BQ8IZJ1 945 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ARMC10Q8N2F6 343 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 LRRC71Q8N4P6 559 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 HJURPQ8NCD3 748 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 FBXO36Q8NEA4 188 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 JPH3Q8WXH2 748 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 CYFIP2Q96F07 1278 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 SNF8Q96H20 258 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 WDR83Q9BRX9 315 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 MFSD1Q9H3U5 465 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ARHGEF4Q9NR80 690 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 TLR9Q9NR96 1032 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 GOLGA6AQ9NYA3 693 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 TAS2R14Q9NYV8 317 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 CNOT8Q9UFF9 292 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 DNMT3LQ9UJW3 386 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 USP18Q9UMW8 372 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 SORCS3Q9UPU3 1222 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 HRH3Q9Y5N1 445 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 UBA6A0AVT1 1052 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PDE2AO00408 941 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 VILLO15195 856 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PALMO75781 387 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ITGB1P05556 798 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PRR35P0CG20 571 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 TRIM49P0CI25 452 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 TRIM49CP0CI26 452 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 HOXB9P17482 250 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 IL1RNP18510 177 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 HLA-DPA1P20036 260 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 COMTP21964 271 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 FSHRP23945 695 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 SATB1Q01826 763 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 CLCQ05315 142 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 GFPT1Q06210 699 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 HTR4Q13639 388 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 STAT4Q14765 748 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 SMAD2Q15796 467 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ADAMTSL4Q6UY14 1074 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ERICH1Q86X53 443 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ANKRD42Q8N9B4 389 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PCDH19Q8TAB3 1148 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 DQX1Q8TE96 717 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ATXN2LQ8WWM7 1075 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ARNTL2Q8WYA1 636 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 RSC1A1Q92681 617 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 L3HYPDHQ96EM0 354 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 MAELQ96JY0 434 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PRICKLE1Q96MT3 831 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ZNF285Q96NJ3 590 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PPP1R16BQ96T49 567 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PANK2Q9BZ23 570 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 CXCL16Q9H2A7 254 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ACSS3Q9H6R3 686 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 EPB41L5Q9HCM4 733 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ZDHHC4Q9NPG8 344 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 DDX43Q9NXZ2 648 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PIN4Q9Y237 131 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 MAP4K5Q9Y4K4 846 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 KCNMB2Q9Y691 235 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 GOLGA8KD6RF30 607 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ACSL4O60488 711 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 ATP1A1P05023 1023 aaKnown RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 PIM1P11309 404 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-212ENST00000549162 EPB42P16452 691 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 DESP17661 470 aa4.98□□□□□ -1.61
SCAF11-212ENST00000549162 SERPINB1P30740 379 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms