RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 FJX1Q86VR8 437 aa4.24□□□□□ -1.73
CCDC38-206ENST00000548771 MUC20Q8N307 709 aaPredicted RBP4.24□□□□□ -1.73
CCDC38-206ENST00000548771 SCAIQ8N9R8 606 aa4.24□□□□□ -1.73
CCDC38-206ENST00000548771 OR4N2Q8NGD1 307 aa4.24□□□□□ -1.73
CCDC38-206ENST00000548771 TMED6Q8WW62 240 aa4.24□□□□□ -1.73
CCDC38-206ENST00000548771 DUX5Q96PT3 197 aa4.24□□□□□ -1.73
CCDC38-206ENST00000548771 GFM1Q96RP9 751 aaKnown RBP4.24□□□□□ -1.73
CCDC38-206ENST00000548771 MSTO1Q9BUK6 570 aa4.24□□□□□ -1.73
CCDC38-206ENST00000548771 BRD8Q9H0E9 1235 aa4.24□□□□□ -1.73
CCDC38-206ENST00000548771 TMLHEQ9NVH6 421 aa4.24□□□□□ -1.73
CCDC38-206ENST00000548771 GRHL1Q9NZI5 618 aa4.24□□□□□ -1.73
CCDC38-206ENST00000548771 GREB1LQ9C091 1923 aaPredicted RBP4.24□□□□□ -1.73
CCDC38-206ENST00000548771 PRSS47A8MTI9 375 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 SNRNP70P08621 437 aaKnown RBP4.23□□□□□ -1.73
CCDC38-206ENST00000548771 CYP4B1P13584 511 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 DPP6P42658 865 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 POU3F1Q03052 451 aaPredicted RBP4.23□□□□□ -1.73
CCDC38-206ENST00000548771 FOXO1Q12778 655 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 RPS6KA2Q15349 733 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 SMAD1Q15797 465 aaKnown RBP4.23□□□□□ -1.73
CCDC38-206ENST00000548771 ZNF718Q3SXZ3 478 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 MAP9Q49MG5 647 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 KLHL17Q6TDP4 642 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 TMPRSS12Q86WS5 348 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 TMC8Q8IU68 726 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 RFLNBQ8N5W9 214 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 TMEM18Q96B42 140 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 HERC2P3Q9BVR0 1158 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 CLPBQ9H078 707 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 ZNF700Q9H0M5 742 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 THAP1Q9NVV9 213 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 OCIAD1Q9NX40 245 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 KCND3Q9UK17 655 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 BAG5Q9UL15 447 aa4.23□□□□□ -1.73
CCDC38-206ENST00000548771 LOC102724159A0A0B4J2E5 919 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 A0A0U1RQJ8 604 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 ACKR2O00590 384 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 CAMTA2O94983 1202 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 MMP3P08254 477 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 HTR3AP46098 478 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 MXI1P50539 228 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 TNFAIP2Q03169 654 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 CTTNQ14247 550 aaKnown RBP4.22□□□□□ -1.73
CCDC38-206ENST00000548771 PWP2Q15269 919 aaKnown RBP4.22□□□□□ -1.73
CCDC38-206ENST00000548771 HLFQ16534 295 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 HSP90AB2PQ58FF8 381 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 EFHC1Q5JVL4 640 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 CCDC117Q8IWD4 279 aaPredicted RBP4.22□□□□□ -1.73
CCDC38-206ENST00000548771 BRSK2Q8IWQ3 736 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 ATG16L2Q8NAA4 619 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 ZNF114Q8NC26 417 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 GPT2Q8TD30 523 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 C3orf49Q96BT1 292 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 IFT27Q9BW83 186 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 CLK4Q9HAZ1 481 aaKnown RBP4.22□□□□□ -1.73
CCDC38-206ENST00000548771 FBXO40Q9UH90 709 aa4.22□□□□□ -1.73
CCDC38-206ENST00000548771 MORC2Q9Y6X9 1032 aaPredicted RBP4.22□□□□□ -1.73
CCDC38-206ENST00000548771 ABHD14A-ACY1A0A1B0GW23 586 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 H0Y3Z8 333 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 EYA2O00167 538 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 GRID2O43424 1007 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 UMODP07911 640 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 SETSIPP0DME0 302 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 DAOP14920 347 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 DCTDP32321 178 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 RFC1P35251 1148 aaPredicted RBP4.21□□□□□ -1.74
CCDC38-206ENST00000548771 GJC1P36383 396 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 MTNR1AP48039 350 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 RPE65Q16518 533 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 SULT6B1Q6IMI4 303 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 ZNF771Q7L3S4 317 aaPredicted RBP4.21□□□□□ -1.74
CCDC38-206ENST00000548771 PATL1Q86TB9 770 aaKnown RBP4.21□□□□□ -1.74
CCDC38-206ENST00000548771 MIGA1Q8NAN2 632 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 LILRB1Q8NHL6 650 aaPredicted RBP4.21□□□□□ -1.74
CCDC38-206ENST00000548771 TRAPPC9Q96Q05 1148 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 RMDN3Q96TC7 470 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 PCGF6Q9BYE7 350 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 NPFFR1Q9GZQ6 430 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 MVB12BQ9H7P6 319 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 PLEKHA2Q9HB19 425 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 G6PC2Q9NQR9 355 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 HDAC6Q9UBN7 1215 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 CLDN16Q9Y5I7 305 aa4.21□□□□□ -1.74
CCDC38-206ENST00000548771 A0A1B0GVM2 712 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 PLSCR5A0PG75 271 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 LINC01553A4QN01 128 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 FAM157AC9JC47 383 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 SYN3O14994 580 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 ITM2AO43736 263 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 CCNT1O60563 726 aaKnown RBP4.2□□□□□ -1.74
CCDC38-206ENST00000548771 CSF1P09603 554 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 PNPLA4P41247 253 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 THOC5Q13769 683 aaKnown RBP4.2□□□□□ -1.74
CCDC38-206ENST00000548771 RRAGAQ7L523 313 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 CACNA2D3Q8IZS8 1091 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 MCPH1Q8NEM0 835 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 KTI12Q96EK9 354 aaPredicted RBP4.2□□□□□ -1.74
CCDC38-206ENST00000548771 SLC39A13Q96H72 371 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 CCDC136Q96JN2 1154 aa4.2□□□□□ -1.74
CCDC38-206ENST00000548771 ACAD9Q9H845 621 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms