RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 F5H423 210 aaPredicted RBP29.23■■■□□ 2.27
BRF1-213ENST00000548421 SPECC1L-ADORA2AF8WAN1 911 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 TIMM44O43615 452 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 NARSO43776 548 aaKnown RBP29.23■■■□□ 2.27
BRF1-213ENST00000548421 KAT7O95251 611 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 DLDP09622 509 aaKnown RBP29.23■■■□□ 2.27
BRF1-213ENST00000548421 SRFP11831 508 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 SRCP12931 536 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 TNFRSF8P28908 595 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 CTHP32929 405 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 GRIA2P42262 883 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 STK19P49842 368 aaPredicted RBP29.23■■■□□ 2.27
BRF1-213ENST00000548421 MAXP61244 160 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 SEMA5AQ13591 1074 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 PRPSAP1Q14558 356 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 RNASEH2BQ5TBB1 312 aaKnown RBP29.23■■■□□ 2.27
BRF1-213ENST00000548421 NUDT18Q6ZVK8 323 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 SUGP1Q8IWZ8 645 aaKnown RBP29.23■■■□□ 2.27
BRF1-213ENST00000548421 PPIL6Q8IXY8 311 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 SH2D3CQ8N5H7 860 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 CPT1BQ92523 772 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 PARD6BQ9BYG5 372 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 SLC25A51Q9H1U9 297 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 SLC2A4RGQ9NR83 387 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 ERVW-1Q9UQF0 538 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 PIAS3Q9Y6X2 628 aa29.23■■■□□ 2.27
BRF1-213ENST00000548421 TBC1D3BA6NDS4 549 aa29.22■■■□□ 2.27
BRF1-213ENST00000548421 K7ERQ8 282 aa29.22■■■□□ 2.27
BRF1-213ENST00000548421 MUSKO15146 869 aa29.22■■■□□ 2.27
BRF1-213ENST00000548421 APODP05090 189 aa29.22■■■□□ 2.27
BRF1-213ENST00000548421 CARSP49589 748 aaKnown RBP29.22■■■□□ 2.27
BRF1-213ENST00000548421 ITGA8P53708 1063 aa29.22■■■□□ 2.27
BRF1-213ENST00000548421 ALG1LQ6GMV1 187 aa29.22■■■□□ 2.27
BRF1-213ENST00000548421 RALGPS2Q86X27 583 aaPredicted RBP29.22■■■□□ 2.27
BRF1-213ENST00000548421 P2RY13Q9BPV8 354 aa29.22■■■□□ 2.27
BRF1-213ENST00000548421 HEBP1Q9NRV9 189 aa29.22■■■□□ 2.27
BRF1-213ENST00000548421 ANAPC5Q9UJX4 755 aa29.22■■■□□ 2.27
BRF1-213ENST00000548421 FARP1Q9Y4F1 1045 aaPredicted RBP29.22■■■□□ 2.27
BRF1-213ENST00000548421 UQCRHLA0A096LP55 91 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 E7EVH7 732 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 SMAD6O43541 496 aaKnown RBP29.21■■■□□ 2.27
BRF1-213ENST00000548421 UQCRHP07919 91 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 SRPRAP08240 638 aaKnown RBP29.21■■■□□ 2.27
BRF1-213ENST00000548421 VASPP50552 380 aaPredicted RBP29.21■■■□□ 2.27
BRF1-213ENST00000548421 RHOAP61586 193 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 VSNL1P62760 191 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 MORF4L2Q15014 288 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP29.21■■■□□ 2.27
BRF1-213ENST00000548421 CYB5D2Q8WUJ1 264 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 SORCS1Q8WY21 1168 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 EXOC4Q96A65 974 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 GORASP1Q9BQQ3 440 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 FAM129AQ9BZQ8 928 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 CEP44Q9C0F1 390 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 LHX3Q9UBR4 397 aa29.21■■■□□ 2.27
BRF1-213ENST00000548421 MUC22E2RYF6 1773 aaPredicted RBP29.2■■■□□ 2.27
BRF1-213ENST00000548421 GOLGA6CA6NDK9 693 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 GOLGA6BA6NDN3 693 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 GOLGA6DP0CG33 693 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 NNMTP40261 264 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 MAGEA6P43360 314 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 CAV1Q03135 178 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 HLTFQ14527 1009 aaKnown RBP eCLIP29.2■■■□□ 2.26
BRF1-213ENST00000548421 KCNJ11Q14654 390 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 HIBCHQ6NVY1 386 aaPredicted RBP29.2■■■□□ 2.26
BRF1-213ENST00000548421 HOOK3Q86VS8 718 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 UCMAQ8WVF2 138 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 ART4Q93070 314 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 ISG20Q96AZ6 181 aaKnown RBP29.2■■■□□ 2.26
BRF1-213ENST00000548421 IMP4Q96G21 291 aaKnown RBP29.2■■■□□ 2.26
BRF1-213ENST00000548421 MRGPRX3Q96LB0 322 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 GOLGA6AQ9NYA3 693 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 RAB21Q9UL25 225 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 SHOC2Q9UQ13 582 aa29.2■■■□□ 2.26
BRF1-213ENST00000548421 SMAPO00193 183 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 TP73O15350 636 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 ANXA9O76027 345 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 APRTP07741 180 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 GLULP15104 373 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 GALK1P51570 392 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 PLTPP55058 493 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 NSUN2Q08J23 767 aaKnown RBP eCLIP29.19■■■□□ 2.26
BRF1-213ENST00000548421 PTPRNQ16849 979 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 NAT8LQ8N9F0 302 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 EIF1ADQ8N9N8 165 aaKnown RBP29.19■■■□□ 2.26
BRF1-213ENST00000548421 MSANTD3Q96H12 275 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 EXOC2Q96KP1 924 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 SEMA3CQ99985 751 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 EIF2B3Q9NR50 452 aaKnown RBP29.19■■■□□ 2.26
BRF1-213ENST00000548421 DUSP12Q9UNI6 340 aa29.19■■■□□ 2.26
BRF1-213ENST00000548421 AAR2Q9Y312 384 aaKnown RBP29.19■■■□□ 2.26
BRF1-213ENST00000548421 TPSB2P20231 275 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 CES1P23141 567 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 RGRP47804 291 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 LMAN1P49257 510 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 DSC2Q02487 901 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 NIPAL4Q0D2K0 466 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 TPSAB1Q15661 275 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 ANKRD22Q5VYY1 191 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 C22orf39Q6P5X5 142 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms