RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 KIAA1614Q5VZ46 1190 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 GUSBP11Q6P575 273 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 GBP6Q6ZN66 633 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 ENOSF1Q7L5Y1 443 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 EFL1Q7Z2Z2 1120 aaKnown RBP12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 ABI3BPQ7Z7G0 1075 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 SLC47A2Q86VL8 602 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 LSMEM2Q8N112 164 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 OR6K2Q8NGY2 324 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 ATXN7L3BQ96GX2 97 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 TBCBQ99426 244 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 NPY6RQ99463 290 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 ZDHHC6Q9H6R6 413 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 KLF15Q9UIH9 416 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 WASF2Q9Y6W5 498 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 COL6A6A6NMZ7 2263 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 PMS2P1A4D2B8 440 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 IGLON5A6NGN9 336 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 J3QKU1 62 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 ERVH48-1M5A8F1 160 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 FOXN3O00409 490 aaPredicted RBP12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 NEMP1O14524 444 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 MUSKO15146 869 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 ADRB3P13945 408 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 JUNDP17535 347 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 RBMS1P29558 406 aaKnown RBP12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 CLCN1P35523 988 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 CXCR3P49682 368 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 MARSP56192 900 aaKnown RBP12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 RPS21P63220 83 aaKnown RBP12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 SGCGQ13326 291 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 TCEA2Q15560 299 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 ISXQ2M1V0 245 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 TMEM259Q4ZIN3 620 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 CARD16Q5EG05 197 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 PERM1Q5SV97 790 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 TPRG1LQ5T0D9 272 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 FOXR2Q6PJQ5 311 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 LEKR1Q6ZMV7 388 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 SLC26A9Q7LBE3 791 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 DRC7Q8IY82 874 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 DCAF4L2Q8NA75 395 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 ZNF548Q8NEK5 533 aaPredicted RBP12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 PPP1R16AQ96I34 528 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 HIC2Q96JB3 615 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 HEPHQ9BQS7 1158 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 DUSP23Q9BVJ7 150 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 HDAC8Q9BY41 377 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 TM6SF2Q9BZW4 377 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 TCEAL2Q9H3H9 227 aaPredicted RBP12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 ATP13A1Q9HD20 1204 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 ARHGEF38Q9NXL2 777 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 APEX2Q9UBZ4 518 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 GGT7Q9UJ14 662 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 DNAJC12Q9UKB3 198 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 ITM2BQ9Y287 266 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 FADS3Q9Y5Q0 445 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 HS3ST3A1Q9Y663 406 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 ANKRD36A6QL64 1941 aa12.19□□□□□ -0.46
TRAFD1-205ENST00000548277 SPTY2D1-AS1A0A0U1RR47 76 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 A0A1W2PNU3 283 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 DRGXA6NNA5 263 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 H3BM21 787 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 GOLGA8SH3BPF8 625 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 FPGTO14772 594 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 SPINT1O43278 529 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 AQP9O43315 295 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 ZNF821O75541 412 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 FGFR1OPO95684 399 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 CSF2P04141 144 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 PON1P27169 355 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 L1CAMP32004 1257 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 MTIF2P46199 727 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 CCNHP51946 323 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 ADKP55263 362 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 SNX16P57768 344 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 RHDQ02161 417 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 CAMK4Q16566 473 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 EXOC3L4Q17RC7 722 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 ZSCAN23Q3MJ62 389 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 LRRC73Q5JTD7 316 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 BRMS1LQ5PSV4 323 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 FAM102AQ5T9C2 384 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 TAF3Q5VWG9 929 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 PARS2Q7L3T8 475 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 PHLDB2Q86SQ0 1253 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 SETD3Q86TU7 594 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 DCP2Q8IU60 420 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 ZNF683Q8IZ20 524 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 RBFAQ8N0V3 343 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 NETO2Q8NC67 525 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 SHC3Q92529 594 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 IL12RB2Q99665 862 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 ASCL3Q9NQ33 180 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 THSD1Q9NS62 852 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 EVA1BQ9NVM1 165 aa12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 HECAQ9UBI9 543 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-205ENST00000548277 STAP1Q9ULZ2 295 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms