RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 GDAP1L1Q96MZ0 367 aa14□□□□□ -0.17
PTCH1-213ENST00000546820 HEPHQ9BQS7 1158 aa14□□□□□ -0.17
PTCH1-213ENST00000546820 TLR10Q9BXR5 811 aa14□□□□□ -0.17
PTCH1-213ENST00000546820 CD248Q9HCU0 757 aa14□□□□□ -0.17
PTCH1-213ENST00000546820 HECAQ9UBI9 543 aaPredicted RBP14□□□□□ -0.17
PTCH1-213ENST00000546820 NCKAP1Q9Y2A7 1128 aa14□□□□□ -0.17
PTCH1-213ENST00000546820 PCDHGA2Q9Y5H1 932 aa14□□□□□ -0.17
PTCH1-213ENST00000546820 ACTL7AQ9Y615 435 aa14□□□□□ -0.17
PTCH1-213ENST00000546820 KMT2EQ8IZD2 1858 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 USP27XA6NNY8 438 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 HACD1B0YJ81 288 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 C1QTNF3-AMACRE9PGA6 284 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 MTSS1O43312 755 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 ZNF189O75820 626 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-213ENST00000546820 MAP3K6O95382 1288 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 TDGF1P13385 188 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 CCNB1P14635 433 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 VAV1P15498 845 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 NDUFV2P19404 249 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 OXTRP30559 389 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 CHRNA3P32297 505 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 MMP13P45452 471 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 PXNP49023 591 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-213ENST00000546820 COPAP53621 1224 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 PTPN5P54829 565 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 GNG11P61952 73 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 RPS14P62263 151 aaKnown RBP13.99□□□□□ -0.17
PTCH1-213ENST00000546820 PPIDQ08752 370 aaKnown RBP13.99□□□□□ -0.17
PTCH1-213ENST00000546820 AP1B1Q10567 949 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 XRCC4Q13426 336 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 ZNF235Q14590 738 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 GRM3Q14832 879 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 MYLK3Q32MK0 819 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 TTC31Q49AM3 519 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-213ENST00000546820 ZC3H14Q6PJT7 736 aaKnown RBP13.99□□□□□ -0.17
PTCH1-213ENST00000546820 DPY19L3Q6ZPD9 716 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 MMAAQ8IVH4 418 aaKnown RBP13.99□□□□□ -0.17
PTCH1-213ENST00000546820 SLC35F6Q8N357 371 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 TMIEQ8NEW7 156 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 MDGA1Q8NFP4 955 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 OR2A12Q8NGT7 310 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 TFB1MQ8WVM0 346 aaKnown RBP13.99□□□□□ -0.17
PTCH1-213ENST00000546820 MAIP1Q8WWC4 291 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 HAUS1Q96CS2 278 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 PBKQ96KB5 322 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 PSKH2Q96QS6 385 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 TM6SF2Q9BZW4 377 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 MKRN2Q9H000 416 aaKnown RBP13.99□□□□□ -0.17
PTCH1-213ENST00000546820 ITM2CQ9NQX7 267 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 SAE1Q9UBE0 346 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-213ENST00000546820 IL36AQ9UHA7 158 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 AMACRQ9UHK6 382 aa13.99□□□□□ -0.17
PTCH1-213ENST00000546820 H0Y858 1186 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 H7C0C1 242 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 KRIT1O00522 736 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 ENC1O14682 589 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 ZNF821O75541 412 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-213ENST00000546820 C7P10643 843 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 C5AR1P21730 350 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 CES1P23141 567 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 SLC8A1P32418 973 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 MAPK8P45983 427 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 ATP5OP48047 213 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 CSNK1DP48730 415 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 CCNHP51946 323 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-213ENST00000546820 ADCY2Q08462 1091 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 SLC10A7Q0GE19 358 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 CST6Q15828 149 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 ARSIQ5FYB1 569 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 AADACL2Q6P093 401 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 C11orf74Q86VG3 221 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 TEX26Q8N6G2 289 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 GANCQ8TET4 914 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 MAML1Q92585 1016 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 NELL1Q92832 810 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 PPP1R16AQ96I34 528 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 SPACA7Q96KW9 195 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 OLFM3Q96PB7 478 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 LGMNQ99538 433 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 OMDQ99983 421 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 TPSD1Q9BZJ3 242 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 DYRK4Q9NR20 520 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 RBM22Q9NW64 420 aaKnown RBP eCLIP13.98□□□□□ -0.17
PTCH1-213ENST00000546820 PPM1HQ9ULR3 514 aa13.98□□□□□ -0.17
PTCH1-213ENST00000546820 MAP3K13O43283 966 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 CEP104O60308 925 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 PEX11BO96011 259 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 PECAM1P16284 738 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-213ENST00000546820 PSMD8P48556 350 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 OTUD4Q01804 1114 aaKnown RBP13.97□□□□□ -0.17
PTCH1-213ENST00000546820 ITKQ08881 620 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 DMWDQ09019 674 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 RALGPS1Q5JS13 557 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 DCAF12L1Q5VU92 463 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 USP30Q70CQ3 517 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 SRLQ86TD4 932 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 KBTBD6Q86V97 674 aa13.97□□□□□ -0.17
PTCH1-213ENST00000546820 ZC3H18Q86VM9 953 aaKnown RBP13.97□□□□□ -0.17
PTCH1-213ENST00000546820 SLC13A5Q86YT5 568 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-213ENST00000546820 TSEN2Q8NCE0 465 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms