RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 RAD51Q06609 339 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 PPP2R5EQ16537 467 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 TFDP3Q5H9I0 405 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 ARHGAP36Q6ZRI8 547 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 LPCAT2Q7L5N7 544 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 RFX6Q8HWS3 928 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 CCDC50Q8IVM0 306 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 FAM160A2Q8N612 972 aaPredicted RBP17.09■□□□□ 0.33
CCDC38-203ENST00000546803 UBL4BQ8N7F7 174 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 PLD5Q8N7P1 536 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 PIP4K2CQ8TBX8 421 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 LOXL4Q96JB6 756 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 TSGA13Q96PP4 275 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 OMDQ99983 421 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 FBXL12Q9NXK8 326 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 WSB2Q9NYS7 404 aaPredicted RBP17.09■□□□□ 0.33
CCDC38-203ENST00000546803 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 SEPT3Q9UH03 358 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 IL36AQ9UHA7 158 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 MBD1Q9UIS9 605 aaPredicted RBP17.09■□□□□ 0.33
CCDC38-203ENST00000546803 FZD4Q9ULV1 537 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 EFR3BQ9Y2G0 817 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 DOCK4Q8N1I0 1966 aa17.09■□□□□ 0.33
CCDC38-203ENST00000546803 NDUFS2O75306 463 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 FTCDO95954 541 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 CCNCP24863 283 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 NR2C2P49116 596 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 RENBPP51606 427 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 CCDC15Q0P6D6 951 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 CCDC173Q0VFZ6 552 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 MYLK3Q32MK0 819 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 PMS2CLQ68D20 193 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 LAIR1Q6GTX8 287 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 TIGD7Q6NT04 549 aaPredicted RBP17.08■□□□□ 0.32
CCDC38-203ENST00000546803 BZW1Q7L1Q6 419 aaKnown RBP17.08■□□□□ 0.32
CCDC38-203ENST00000546803 BBS5Q8N3I7 341 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 RYBPQ8N488 228 aaPredicted RBP17.08■□□□□ 0.32
CCDC38-203ENST00000546803 HDDC3Q8N4P3 179 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 FRMD1Q8N878 549 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 CHST14Q8NCH0 376 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 GANCQ8TET4 914 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 FATE1Q969F0 183 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 TOE1Q96GM8 510 aaKnown RBP17.08■□□□□ 0.32
CCDC38-203ENST00000546803 ALS2CR12Q96Q35 445 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 PHOX2BQ99453 314 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 CINPQ9BW66 212 aaPredicted RBP17.08■□□□□ 0.32
CCDC38-203ENST00000546803 BTBD1Q9H0C5 482 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 PCED1AQ9H1Q7 454 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 DUSP15Q9H1R2 295 aaPredicted RBP17.08■□□□□ 0.32
CCDC38-203ENST00000546803 SGK2Q9HBY8 427 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 LZTFL1Q9NQ48 299 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 LHX3Q9UBR4 397 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 SARDHQ9UL12 918 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 CACNA1HO95180 2353 aa17.08■□□□□ 0.32
CCDC38-203ENST00000546803 MYO18AQ92614 2054 aaKnown RBP17.08■□□□□ 0.32
CCDC38-203ENST00000546803 hCG_1818297A0A087WSY0 165 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 A0A1W2PP55 124 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 SLC7A4O43246 635 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 CST8O60676 142 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 CTSLP07711 333 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 TGM2P21980 687 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 PTPN7P35236 360 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 HSPA9P38646 679 aaKnown RBP17.07■□□□□ 0.32
CCDC38-203ENST00000546803 CSNK1DP48730 415 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 RPL6Q02878 288 aaKnown RBP17.07■□□□□ 0.32
CCDC38-203ENST00000546803 ZNF33AQ06730 810 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 NSUN2Q08J23 767 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC38-203ENST00000546803 SLC10A2Q12908 348 aaPredicted RBP17.07■□□□□ 0.32
CCDC38-203ENST00000546803 HNRNPDQ14103 355 aaKnown RBP17.07■□□□□ 0.32
CCDC38-203ENST00000546803 LBRQ14739 615 aaKnown RBP17.07■□□□□ 0.32
CCDC38-203ENST00000546803 GRM3Q14832 879 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 ARSIQ5FYB1 569 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 CADM4Q8NFZ8 388 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 HDAC11Q96DB2 347 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 FAM122AQ96E09 287 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 PPP1R16AQ96I34 528 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 PSKH2Q96QS6 385 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 OSBPL1AQ9BXW6 950 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 BRD8Q9H0E9 1235 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 KCNF1Q9H3M0 494 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 CD93Q9NPY3 652 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 DYRK4Q9NR20 520 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 HEY1Q9Y5J3 304 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 WASF2Q9Y6W5 498 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 MUC6Q6W4X9 2439 aa17.07■□□□□ 0.32
CCDC38-203ENST00000546803 KPNA3O00505 521 aaPredicted RBP17.06■□□□□ 0.32
CCDC38-203ENST00000546803 ZSCAN12O43309 604 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 LEFTY1O75610 366 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 RNASEH2AO75792 299 aaKnown RBP17.06■□□□□ 0.32
CCDC38-203ENST00000546803 PEX11BO96011 259 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 KRT10P13645 584 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 PLA2G5P39877 138 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 MAPK8P45983 427 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 SLC10A7Q0GE19 358 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 ZNF235Q14590 738 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 PDK1Q15118 436 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 ATXN7L2Q5T6C5 722 aaPredicted RBP17.06■□□□□ 0.32
CCDC38-203ENST00000546803 MARC1Q5VT66 337 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 KAZNQ674X7 775 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 FAM124AQ86V42 546 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms