RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SERINC3Q13530 473 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 DPYSL2Q16555 572 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 HADHQ16836 314 aaKnown RBP16.01■□□□□ 0.15
CCDC78-216ENST00000544996 SMTNL2Q2TAL5 461 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 INO80DQ53TQ3 878 aaPredicted RBP16.01■□□□□ 0.15
CCDC78-216ENST00000544996 KCNT1Q5JUK3 1230 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 AGBL4Q5VU57 503 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 IL27RAQ6UWB1 636 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 LEKR1Q6ZMV7 388 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 MINDY1Q8N5J2 469 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 OR2AP1Q8NGE2 309 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 TEKT4Q8WW24 435 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 FAM131CQ96AQ9 280 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 LRIG1Q96JA1 1093 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 BTBD6Q96KE9 485 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 CHP1Q99653 195 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 TM6SF2Q9BZW4 377 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 TM9SF3Q9HD45 589 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC78-216ENST00000544996 ACTL7AQ9Y615 435 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 A0A1W2PPC4 97 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 POP4O95707 220 aaKnown RBP16■□□□□ 0.15
CCDC78-216ENST00000544996 TMEM253P0C7T8 217 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 RARAP10276 462 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 ERCC2P18074 760 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 IL1R2P27930 398 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 CSNK1EP49674 416 aaKnown RBP16■□□□□ 0.15
CCDC78-216ENST00000544996 RACK1P63244 317 aaKnown RBP16■□□□□ 0.15
CCDC78-216ENST00000544996 GRIK2Q13002 908 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 TBX2Q13207 712 aaPredicted RBP16■□□□□ 0.15
CCDC78-216ENST00000544996 ADAT2Q7Z6V5 191 aaKnown RBP16■□□□□ 0.15
CCDC78-216ENST00000544996 PRPF39Q86UA1 669 aaKnown RBP16■□□□□ 0.15
CCDC78-216ENST00000544996 LZTR1Q8N653 840 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 SKA1Q96BD8 255 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 CELF6Q96J87 481 aaKnown RBP16■□□□□ 0.15
CCDC78-216ENST00000544996 PACSIN1Q9BY11 444 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 HDAC8Q9BY41 377 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 RBSNQ9H1K0 784 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 ZDHHC6Q9H6R6 413 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 LRRC19Q9H756 370 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 PREBQ9HCU5 417 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 CWC15Q9P013 229 aaKnown RBP16■□□□□ 0.15
CCDC78-216ENST00000544996 WASF2Q9Y6W5 498 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 CEP250Q9BV73 2442 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 TNRC6BQ9UPQ9 1833 aaKnown RBP16■□□□□ 0.15
CCDC78-216ENST00000544996 DOCK4Q8N1I0 1966 aa16■□□□□ 0.15
CCDC78-216ENST00000544996 KRIT1O00522 736 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 TMCC1O94876 653 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 CER1O95813 267 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 TCF4P15884 667 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 KCNA4P22459 653 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 NUDT1P36639 197 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 GRIA4P48058 902 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 RAD51Q06609 339 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 KRT81Q14533 505 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 PPM1JQ5JR12 505 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 PIP5KL1Q5T9C9 394 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 NEK5Q6P3R8 708 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 FBXL19Q6PCT2 694 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 ERN2Q76MJ5 926 aaKnown RBP15.99■□□□□ 0.15
CCDC78-216ENST00000544996 ARRDC3Q96B67 414 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 GDAP1L1Q96MZ0 367 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 SLC39A8Q9C0K1 460 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 KLC2Q9H0B6 622 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 UBA2Q9UBT2 640 aaPredicted RBP15.99■□□□□ 0.15
CCDC78-216ENST00000544996 SPTBN4Q9H254 2564 aa15.99■□□□□ 0.15
CCDC78-216ENST00000544996 A0A1B0GVT2 93 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 DFFAO00273 331 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 LATO43561 262 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 PROSCO94903 275 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 IGSF6O95976 241 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 ITGB7P26010 798 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 PAPOLAP51003 745 aaKnown RBP15.98■□□□□ 0.15
CCDC78-216ENST00000544996 NEK3P51956 506 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 C21orf59P57076 290 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 RHOAP61586 193 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 SLC25A11Q02978 314 aaKnown RBP15.98■□□□□ 0.15
CCDC78-216ENST00000544996 SLC14A1Q13336 389 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 DPYSQ14117 519 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 MYLK3Q32MK0 819 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 SETMARQ53H47 684 aaPredicted RBP15.98■□□□□ 0.15
CCDC78-216ENST00000544996 SLC45A4Q5BKX6 768 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 TMCO3Q6UWJ1 677 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 POLNQ7Z5Q5 900 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 TRIM69Q86WT6 500 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 OR6K2Q8NGY2 324 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 MRFAP1L1Q96HT8 127 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 SERAC1Q96JX3 654 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 ORAI3Q9BRQ5 295 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 ANP32EQ9BTT0 268 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 OSBPL1AQ9BXW6 950 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 SLC32A1Q9H598 525 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 AASDHPPTQ9NRN7 309 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 SPTLC3Q9NUV7 552 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 DNAAF2Q9NVR5 837 aaKnown RBP15.98■□□□□ 0.15
CCDC78-216ENST00000544996 ANKRD6Q9Y2G4 727 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 SLCO1B1Q9Y6L6 691 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 CEP192Q8TEP8 1941 aa15.98■□□□□ 0.15
CCDC78-216ENST00000544996 PRAMEF11O60813 436 aa15.97■□□□□ 0.15
CCDC78-216ENST00000544996 CSRP1P21291 193 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms