RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 VAT1Q99536 393 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 IER2Q9BTL4 223 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 COL25A1Q9BXS0 654 aaPredicted RBP13.31□□□□□ -0.28
DDX11-227ENST00000544652 CHRDQ9H2X0 955 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 CD248Q9HCU0 757 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 DLGAP2Q9P1A6 1054 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 LHX3Q9UBR4 397 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 SIT1Q9Y3P8 196 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 MRFAP1Q9Y605 127 aa13.31□□□□□ -0.28
DDX11-227ENST00000544652 TARSL2A2RTX5 802 aaKnown RBP13.3□□□□□ -0.28
DDX11-227ENST00000544652 CFAP69A5D8W1 941 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 TTC34A8MYJ7 566 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 WASH3PC4AMC7 463 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 CCDC188H7C350 402 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 KCNK1O00180 336 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 TNFRSF10AO00220 468 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 KRIT1O00522 736 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 AOC1P19801 751 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 CR2P20023 1033 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 PTPN3P26045 913 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 HSPA9P38646 679 aaKnown RBP13.3□□□□□ -0.28
DDX11-227ENST00000544652 MMP13P45452 471 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 CLCN5P51795 746 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 NSUN2Q08J23 767 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDX11-227ENST00000544652 ZBTB17Q13105 803 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 FNDC3BQ53EP0 1204 aaKnown RBP13.3□□□□□ -0.28
DDX11-227ENST00000544652 TEX44Q53QW1 395 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 ALG1LQ6GMV1 187 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 PKN3Q6P5Z2 889 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 DARS2Q6PI48 645 aaKnown RBP13.3□□□□□ -0.28
DDX11-227ENST00000544652 SERPINA13PQ6UXR4 307 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 Q6ZS52 159 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 B4GALNT4Q76KP1 1039 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 CHPFQ8IZ52 775 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 PGBD5Q8N414 524 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 CNTD1Q8N815 330 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 TXNDC5Q8NBS9 432 aaKnown RBP13.3□□□□□ -0.28
DDX11-227ENST00000544652 NSMCE1Q8WV22 266 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 SLC39A7Q92504 469 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 VOPP1Q96AW1 172 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 RTP4Q96DX8 246 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 MGME1Q9BQP7 344 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 AP1M1Q9BXS5 423 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 MFSD1Q9H3U5 465 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 ZDHHC4Q9NPG8 344 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 CACNA2D2Q9NY47 1150 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 SEPT3Q9UH03 358 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 SUN2Q9UH99 717 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 MMP17Q9ULZ9 603 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 SLC8A2Q9UPR5 921 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 ATP8A1Q9Y2Q0 1164 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 FCF1Q9Y324 198 aaKnown RBP13.3□□□□□ -0.28
DDX11-227ENST00000544652 SCN8AQ9UQD0 1980 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 FANCMQ8IYD8 2048 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 NCOR1O75376 2440 aa13.3□□□□□ -0.28
DDX11-227ENST00000544652 GOLGA6L10A0A0M3HER8 536 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 EDDM13A0A1B0GTR0 161 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 SGK1O00141 431 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 MUSKO15146 869 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 ATG13O75143 517 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 PHF2O75151 1096 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 KLF8O95600 359 aaPredicted RBP13.29□□□□□ -0.28
DDX11-227ENST00000544652 GSRP00390 522 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 HLA-DQB2P05538 268 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 HLA-EP13747 358 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 STIP1P31948 543 aaKnown RBP13.29□□□□□ -0.28
DDX11-227ENST00000544652 CSNK1DP48730 415 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 CAMK2GQ13555 558 aaPredicted RBP13.29□□□□□ -0.28
DDX11-227ENST00000544652 WHAMMP3Q1A5X7 153 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 EOGTQ5NDL2 527 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 C9orf64Q5T6V5 341 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 SDE2Q6IQ49 451 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 TTC27Q6P3X3 843 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 MAMSTRQ6ZN01 415 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 SYT13Q7L8C5 426 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 BBS5Q8N3I7 341 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 TSEN2Q8NCE0 465 aaKnown RBP13.29□□□□□ -0.28
DDX11-227ENST00000544652 FLCNQ8NFG4 579 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 OR2AP1Q8NGE2 309 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 OR2A12Q8NGT7 310 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 MAGOHBQ96A72 148 aaKnown RBP13.29□□□□□ -0.28
DDX11-227ENST00000544652 TEKT5Q96M29 485 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 TMEM121Q9BTD3 319 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 CINPQ9BW66 212 aaPredicted RBP13.29□□□□□ -0.28
DDX11-227ENST00000544652 C10orf88Q9H8K7 445 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 RBM22Q9NW64 420 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDX11-227ENST00000544652 TRIOO75962 3097 aa13.29□□□□□ -0.28
DDX11-227ENST00000544652 PLXNA2O75051 1894 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 A0A1W2PQF6 199 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 C5orf60A6NFR6 353 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 RNF103O00237 685 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 ALOX15BO15296 676 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 KCNN4O15554 427 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 PI15O43692 258 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 SIN3BO75182 1162 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 JCHAINP01591 159 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 EPHX1P07099 455 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 HOXB2P14652 356 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 CHRNA3P32297 505 aa13.28□□□□□ -0.28
DDX11-227ENST00000544652 COILP38432 576 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms