RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 A0A1B0GVM2 712 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 FAM92AA1XBS5 289 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TMX2-CTNND1H3BSU7 103 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TRIM38O00635 465 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 EPB41L2O43491 1005 aaKnown RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 HCRTO43612 131 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 PFKFB2O60825 505 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 ATP2C2O75185 946 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TACC1O75410 805 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 REC8O95072 547 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 AGFG2O95081 481 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TNFSF15O95150 251 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 KCNH1O95259 989 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TNNC2P02585 160 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 GSNP06396 782 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 ATP5BP06576 529 aaKnown RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 CEACAM5P06731 702 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 PDGFRBP09619 1106 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 LIPCP11150 499 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 PABPC1P11940 636 aaKnown RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 LMO2P25791 158 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TNFRSF8P28908 595 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 HOXC12P31275 282 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 GNL1P36915 607 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 CLCN7P51798 805 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 GALCP54803 685 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 RPS14P62263 151 aaKnown RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 GTF2BQ00403 316 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 STAT4Q14765 748 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 ZNF174Q15697 407 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TBR1Q16650 682 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 CCDC142Q17RM4 750 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 FAM209AQ5JX71 171 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TTC38Q5R3I4 469 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 MANEAQ5SRI9 462 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 FHL5Q5TD97 284 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 YOD1Q5VVQ6 348 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 FYB2Q5VWT5 728 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 GTF2IRD2BQ6EKJ0 949 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 SLC39A4Q6P5W5 647 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 NCEH1Q6PIU2 408 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 RBM44Q6ZP01 1051 aaKnown RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TMC6Q7Z403 805 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 LIMS2Q7Z4I7 341 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 THAP5Q7Z6K1 395 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 C14orf80Q86SX3 495 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 PRPF39Q86UA1 669 aaKnown RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 GTF2IRD2Q86UP8 949 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TSPYL5Q86VY4 417 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TICAM1Q8IUC6 712 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 BRSK2Q8IWQ3 736 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 MYCT1Q8N699 235 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 ZNF655Q8N720 491 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 ZNF557Q8N988 423 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 OR6B3Q8NGW1 331 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 IFI44Q8TCB0 444 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 BTN2A2Q8WVV5 523 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 KBTBD7Q8WVZ9 684 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 GTF3C6Q969F1 213 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 HVCN1Q96D96 273 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 MOCOSQ96EN8 888 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 ATXN7L3BQ96GX2 97 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 PRR11Q96HE9 360 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 HPDLQ96IR7 371 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 PIWIL1Q96J94 861 aaKnown RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 CDK5RAP3Q96JB5 506 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 CCDC140Q96MF4 163 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 OMDQ99983 421 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 DCLK3Q9C098 648 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TMEM245Q9H330 911 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 PABPC3Q9H361 631 aaKnown RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 TRIT1Q9H3H1 467 aaKnown RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 DMAP1Q9NPF5 467 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 SEMA3GQ9NS98 782 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 PDRG1Q9NUG6 133 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 GPATCH2Q9NW75 528 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 FBXL12Q9NXK8 326 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 RBAKQ9NYW8 714 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 NLGN3Q9NZ94 848 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 IL37Q9NZH6 218 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 NOL7Q9UMY1 257 aaKnown RBP4.25□□□□□ -1.73
SNHG1-220ENST00000544550 EXOC7Q9UPT5 735 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 DMTF1Q9Y222 760 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 ENTPD2Q9Y5L3 495 aa4.25□□□□□ -1.73
SNHG1-220ENST00000544550 CFAP46Q8IYW2 2715 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 UBE4BO95155 1302 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 OBSL1O75147 1896 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 ASXL3Q9C0F0 2248 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 TRBV23-1A0A0A0MS06 115 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 VPS37CA5D8V6 355 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 PRODHO43272 600 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 SDC3O75056 442 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 TBCAO75347 108 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 RNASEH2AO75792 299 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 PRPF6O94906 941 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 ASMTLO95671 621 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 SCG5P05408 212 aa4.24□□□□□ -1.73
SNHG1-220ENST00000544550 KRT18P05783 430 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 DLDP09622 509 aaKnown RBP4.24□□□□□ -1.73
SNHG1-220ENST00000544550 PLA2G4BP0C869 781 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms