RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 OR5F1O95221 314 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 MMP13P45452 471 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 TPGS1Q6ZTW0 290 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 DHDDSQ86SQ9 333 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 GIPC3Q8TF64 312 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 DNAJB3Q8WWF6 145 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 LENG1Q96BZ8 264 aaPredicted RBP15.61■□□□□ 0.09
CHD4-210ENST00000544040 TBC1D10AQ9BXI6 508 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 SLC12A4Q9UP95 1085 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 ERGIC3Q9Y282 383 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 IGSF6O95976 241 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 POU5F1Q01860 360 aaKnown RBP15.61■□□□□ 0.09
CHD4-210ENST00000544040 KLHL32Q96NJ5 620 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 CITED4Q96RK1 184 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 TMEM216Q9P0N5 145 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 WBP11Q9Y2W2 641 aaKnown RBP15.61■□□□□ 0.09
CHD4-210ENST00000544040 PCDHB5Q9Y5E4 795 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 ALDH2P05091 517 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 SPAG4Q9NPE6 437 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 SCAMP3O14828 347 aaKnown RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 LTA4HP09960 611 aaKnown RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 ZNF268Q14587 947 aaPredicted RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 ALKBH2Q6NS38 261 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 RETSATQ6NUM9 610 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 ZNF549Q6P9A3 640 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 CKAP2Q8WWK9 683 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 LACTBL1A8MY62 500 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 E5RJQ4 531 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 NOS1APO75052 506 aaPredicted RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 LRATO95237 230 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 MYL9P24844 172 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 CASP5P51878 434 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 ACLYP53396 1101 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 NAGLUP54802 743 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 RPL38P63173 70 aaKnown RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 ULK3Q6PHR2 472 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 PANX3Q96QZ0 392 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 RACGAP1Q9H0H5 632 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 LRMDAQ9H2I8 198 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 RAB21Q9UL25 225 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 A0A0U1RQJ8 604 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 KPNA3O00505 521 aaPredicted RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 TRDMT1O14717 391 aaKnown RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 LINC00032P0C843 101 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 TRIM28Q13263 835 aaKnown RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 COLGALT2Q8IYK4 626 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 HTRA1Q92743 480 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 SMARCD1Q96GM5 515 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 EGFL7Q9UHF1 273 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 ZNF232Q9UNY5 417 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 PPP2R3BQ9Y5P8 575 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 TNS3Q68CZ2 1445 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 FARP2O94887 1054 aaPredicted RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 CD86P42081 329 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 CARTPTQ16568 116 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 C15orf59Q2T9L4 293 aaPredicted RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 SLC39A12Q504Y0 691 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 GRIN3AQ8TCU5 1115 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 STARD8Q92502 1023 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 DNAJC1Q96KC8 554 aaKnown RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 PRKAR1AP10644 381 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 HSPA14Q0VDF9 509 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 FAM171A1Q5VUB5 890 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 ASB2Q96Q27 587 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 SLC38A2Q96QD8 506 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 CAB39LQ9H9S4 337 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 TMEM165Q9HC07 324 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 OR10H3O60404 316 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 CYP2A6P11509 494 aaPredicted RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 SP100P23497 879 aaPredicted RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 DGKAP23743 735 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 SLC6A3Q01959 620 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 CBFBQ13951 182 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 C5orf22Q49AR2 442 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 ARMC12Q5T9G4 340 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 DEF8Q6ZN54 512 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 AGMOQ6ZNB7 445 aa15.6■□□□□ 0.09
CHD4-210ENST00000544040 ZCCHC2Q9C0B9 1178 aaKnown RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 RBM7Q9Y580 266 aaKnown RBP15.6■□□□□ 0.09
CHD4-210ENST00000544040 UNC5CO95185 931 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 NPR3P17342 541 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 IRAK1BP1Q5VVH5 260 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 FAM131AQ6UXB0 335 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 KBTBD8Q8NFY9 601 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 PHF10Q8WUB8 498 aaKnown RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 TRAPPC12Q8WVT3 735 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 ATP5BP06576 529 aaKnown RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 CDH3P22223 829 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 BDNFP23560 247 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 CAP2P40123 477 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 FBXO42Q6P3S6 717 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 AKAP14Q86UN6 197 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 CREG2Q8IUH2 290 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 SLC47A1Q96FL8 570 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 ZNF304Q9HCX3 659 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 TAS2R14Q9NYV8 317 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 HACD1B0YJ81 288 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 LGR5O75473 907 aa15.59■□□□□ 0.09
CHD4-210ENST00000544040 FADS2O95864 444 aaKnown RBP15.59■□□□□ 0.09
CHD4-210ENST00000544040 CEBPGP53567 150 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms