RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CCDC134Q9H6E4 229 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 ATP13A1Q9HD20 1204 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 PPANQ9NQ55 473 aaKnown RBP20.13■□□□□ 0.81
COPS7A-218ENST00000543939 LSM7Q9UK45 103 aaKnown RBP20.13■□□□□ 0.81
COPS7A-218ENST00000543939 SMG5Q9UPR3 1016 aaKnown RBP20.13■□□□□ 0.81
COPS7A-218ENST00000543939 TYROBPO43914 113 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 TBL1XO60907 577 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 SPAG7O75391 227 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 CA3P07451 260 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 KRT4P19013 534 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 HOXA9P31269 272 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 CD86P42081 329 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 OXCT1P55809 520 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 MGAT5Q09328 741 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 ZNF783Q6ZMS7 281 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 ANKRD42Q8N9B4 389 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.13■□□□□ 0.81
COPS7A-218ENST00000543939 SHKBP1Q8TBC3 707 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 CDKL2Q92772 493 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 TMA16Q96EY4 203 aaKnown RBP20.13■□□□□ 0.81
COPS7A-218ENST00000543939 CERS2Q96G23 380 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 ARNT2Q9HBZ2 717 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 CFAP97Q9P2B7 532 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 ZNF510Q9Y2H8 683 aa20.13■□□□□ 0.81
COPS7A-218ENST00000543939 LAMA2P24043 3122 aaKnown RBP20.12■□□□□ 0.81
COPS7A-218ENST00000543939 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.12■□□□□ 0.81
COPS7A-218ENST00000543939 MUSKO15146 869 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 KRT37O76014 449 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 FGF19O95750 216 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 SNRPAP09012 282 aaKnown RBP20.12■□□□□ 0.81
COPS7A-218ENST00000543939 EPCAMP16422 314 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 PTPN2P17706 415 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 NUMBP49757 651 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 SEC24CP53992 1094 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 ZNF235Q14590 738 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 PCID2Q5JVF3 399 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 LGSNQ5TDP6 509 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 RNF219Q5W0B1 726 aaPredicted RBP20.12■□□□□ 0.81
COPS7A-218ENST00000543939 ALG1LQ6GMV1 187 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 MGARPQ8TDB4 240 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 DENND1AQ8TEH3 1009 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 SAMD11Q96NU1 681 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 POLR1EQ9GZS1 481 aaKnown RBP20.12■□□□□ 0.81
COPS7A-218ENST00000543939 CHRAC1Q9NRG0 131 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 NKIRAS1Q9NYS0 192 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 DNMT3BQ9UBC3 853 aaKnown RBP20.12■□□□□ 0.81
COPS7A-218ENST00000543939 SH3BP1Q9Y3L3 701 aa20.12■□□□□ 0.81
COPS7A-218ENST00000543939 GMNCA6NCL1 334 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 TRIM49D1C9J1S8 452 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 MT-ND3P03897 115 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 GLDCP23378 1020 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 SERPINB9P50453 376 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 LRRC14Q15048 493 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 PDE12Q6L8Q7 609 aaKnown RBP20.11■□□□□ 0.81
COPS7A-218ENST00000543939 POTEHQ6S545 545 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 SH2D5Q6ZV89 423 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 CPXM2Q8N436 756 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 BCAS4Q8TDM0 211 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 ALKBH8Q96BT7 664 aaKnown RBP20.11■□□□□ 0.81
COPS7A-218ENST00000543939 MFSD3Q96ES6 412 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 SGSM3Q96HU1 749 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 SERAC1Q96JX3 654 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 TGS1Q96RS0 853 aaKnown RBP20.11■□□□□ 0.81
COPS7A-218ENST00000543939 UBA2Q9UBT2 640 aaPredicted RBP20.11■□□□□ 0.81
COPS7A-218ENST00000543939 ARHGAP26Q9UNA1 814 aa20.11■□□□□ 0.81
COPS7A-218ENST00000543939 TYW5A2RUC4 315 aaKnown RBP20.1■□□□□ 0.81
COPS7A-218ENST00000543939 LEFTY2O00292 366 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 MOSPD3O75425 235 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 KRT38O76015 456 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 LUC7L3O95232 432 aaKnown RBP20.1■□□□□ 0.81
COPS7A-218ENST00000543939 HNRNPA1P09651 372 aaKnown RBP eCLIP20.1■□□□□ 0.81
COPS7A-218ENST00000543939 ERVK-10P10266 1014 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 DDX6P26196 483 aaKnown RBP eCLIP20.1■□□□□ 0.81
COPS7A-218ENST00000543939 NMBRP28336 390 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 ERVK-21P61565 698 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 DMTNQ08495 405 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 RFTN1Q14699 578 aaPredicted RBP20.1■□□□□ 0.81
COPS7A-218ENST00000543939 SHHQ15465 462 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 PCSK7Q16549 785 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 PKN3Q6P5Z2 889 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 CARNMT1Q8N4J0 409 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 BANPQ8N9N5 519 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 MTBPQ96DY7 904 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 TCEAL4Q96EI5 215 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 SEMA3CQ99985 751 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 RABEP2Q9H5N1 569 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 SEPT3Q9UH03 358 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 ACTL7AQ9Y615 435 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 ATG2AQ2TAZ0 1938 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 TTC24A2A3L6 582 aaPredicted RBP20.1■□□□□ 0.81
COPS7A-218ENST00000543939 HMX2A2RU54 273 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 H0Y626 953 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 RHOP08100 348 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 GBP2P32456 591 aaPredicted RBP20.1■□□□□ 0.81
COPS7A-218ENST00000543939 CHRNA4P43681 627 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 SLC18A2Q05940 514 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 FSCBQ5H9T9 825 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 GPR158Q5T848 1215 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 ARMC3Q5W041 872 aa20.1■□□□□ 0.81
COPS7A-218ENST00000543939 KDELC2Q7Z4H8 507 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms