RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 PTBP2Q9UKA9 531 aaKnown RBP12.84□□□□□ -0.35
SMG8-202ENST00000543872 M0QYV0 167 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 PHGDHO43175 533 aaKnown RBP12.83□□□□□ -0.35
SMG8-202ENST00000543872 TADA2AO75478 443 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 GPD1P21695 349 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 IL4RP24394 825 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 POLR2IP36954 125 aaKnown RBP12.83□□□□□ -0.35
SMG8-202ENST00000543872 RGS7P49802 495 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 MCCD1P59942 119 aaPredicted RBP12.83□□□□□ -0.35
SMG8-202ENST00000543872 TNK2Q07912 1038 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 ZIK1Q3SY52 487 aaPredicted RBP12.83□□□□□ -0.35
SMG8-202ENST00000543872 HEATR6Q6AI08 1181 aaKnown RBP12.83□□□□□ -0.35
SMG8-202ENST00000543872 FSTL4Q6MZW2 842 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 ABRAXAS1Q6UWZ7 409 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 SPPL2CQ8IUH8 684 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 EXOC8Q8IYI6 725 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 MAGEE2Q8TD90 523 aaPredicted RBP12.83□□□□□ -0.35
SMG8-202ENST00000543872 FNIP1Q8TF40 1166 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 OMDQ99983 421 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 ACE2Q9BYF1 805 aaPredicted RBP12.83□□□□□ -0.35
SMG8-202ENST00000543872 UNC93B1Q9H1C4 597 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 RAD21L1Q9H4I0 556 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 OAZ3Q9UMX2 235 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 PCDHGA3Q9Y5H0 932 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 V9GYQ6 96 aa12.83□□□□□ -0.35
SMG8-202ENST00000543872 TMEM114B3SHH9 223 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 MYF6P23409 242 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 MAGEA3P43357 314 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 HSD17B4P51659 736 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 SLC27A3Q5K4L6 730 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 FAM219BQ5XKK7 198 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 PRR5LQ6MZQ0 368 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 PIGZQ86VD9 579 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 SLC4A11Q8NBS3 891 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 PDZD8Q8NEN9 1154 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 ZNF669Q96BR6 464 aaPredicted RBP12.83□□□□□ -0.36
SMG8-202ENST00000543872 OLFM1Q99784 485 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 SLC7A5P2Q9GIP4 190 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 SNX25Q9H3E2 840 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 TDRD3Q9H7E2 651 aaKnown RBP12.83□□□□□ -0.36
SMG8-202ENST00000543872 DBNDD1Q9H9R9 158 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 PKD2L2Q9NZM6 624 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 SUCOQ9UBS9 1254 aaKnown RBP12.83□□□□□ -0.36
SMG8-202ENST00000543872 SLC30A1Q9Y6M5 507 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 BCLAF3A2AJT9 711 aaKnown RBP12.83□□□□□ -0.36
SMG8-202ENST00000543872 GPC4O75487 556 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 HPCAL1P37235 193 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 OXA1LQ15070 435 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 GPR162Q16538 588 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 IL31Q6EBC2 164 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 FAM117BQ6P1L5 589 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 PRR23BQ6ZRT6 265 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 ZNF354CQ86Y25 554 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 CDKL3Q8IVW4 592 aaPredicted RBP12.83□□□□□ -0.36
SMG8-202ENST00000543872 DHRSXQ8N5I4 330 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 ABHD11Q8NFV4 315 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 MASTLQ96GX5 879 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 VPS33BQ9H267 617 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 ADNPQ9H2P0 1102 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 PALMDQ9NP74 551 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 MOSPD1Q9UJG1 213 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 ZNF229Q9UJW7 825 aa12.83□□□□□ -0.36
SMG8-202ENST00000543872 DLGAP1O14490 977 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 EI24O14681 340 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 KRT75O95678 551 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 SPRP35270 261 aaPredicted RBP12.82□□□□□ -0.36
SMG8-202ENST00000543872 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 PRKAA1Q13131 559 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 KIAA2013Q8IYS2 634 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 CLIP4Q8N3C7 705 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 URGCPQ8TCY9 931 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 CNPY3Q9BT09 278 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 IFT80Q9P2H3 777 aaPredicted RBP12.82□□□□□ -0.36
SMG8-202ENST00000543872 TLL2Q9Y6L7 1015 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 FAM155AB1AL88 458 aaPredicted RBP12.82□□□□□ -0.36
SMG8-202ENST00000543872 CLDN25C9JDP6 229 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 MRASO14807 208 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 ATP6V1B2P21281 511 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 PTPN9P43378 593 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 KCNC4Q03721 635 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 GALNT2Q10471 571 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 STX5Q13190 355 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 FASTKQ14296 549 aaKnown RBP12.82□□□□□ -0.36
SMG8-202ENST00000543872 TRNP1Q6NT89 227 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 HHIPL2Q6UWX4 724 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 IFNEQ86WN2 208 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 CPSF7Q8N684 471 aaKnown RBP12.82□□□□□ -0.36
SMG8-202ENST00000543872 TERB1Q8NA31 727 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 COLGALT1Q8NBJ5 622 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 MCPH1Q8NEM0 835 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 OR9I1Q8NGQ6 314 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 SNX19Q92543 992 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 CERS2Q96G23 380 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 TSNARE1Q96NA8 513 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 DOK1Q99704 481 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 DGCR6LQ9BY27 220 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 COA1Q9GZY4 146 aa12.82□□□□□ -0.36
SMG8-202ENST00000543872 NOL6Q9H6R4 1146 aaKnown RBP12.82□□□□□ -0.36
SMG8-202ENST00000543872 SPAG4Q9NPE6 437 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms