RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	ARHGAP18	Q8N392	663 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	NAT16	Q8N8M0	369 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	COG1	Q8WTW3	980 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	IRGQ	Q8WZA9	623 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	JAKMIP2	Q96AA8	810 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	PRR11	Q96HE9	360 aa	Predicted RBP	6.63	□□□□□ -1.35
CIT-213	ENST00000543324	LMLN	Q96KR4	655 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	HEXIM2	Q96MH2	286 aa	Known RBP	6.63	□□□□□ -1.35
CIT-213	ENST00000543324	DEPDC7	Q96QD5	511 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	KRTAP17-1	Q9BYP8	105 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	DOCK9	Q9BZ29	2069 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	IRX2	Q9BZI1	471 aa	Predicted RBP	6.63	□□□□□ -1.35
CIT-213	ENST00000543324	ZDHHC4	Q9NPG8	344 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	CNGB3	Q9NQW8	809 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	ZNF71	Q9NQZ8	489 aa	Predicted RBP	6.63	□□□□□ -1.35
CIT-213	ENST00000543324	OLA1	Q9NTK5	396 aa	Known RBP	6.63	□□□□□ -1.35
CIT-213	ENST00000543324	MARCH2	Q9P0N8	246 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	USP36	Q9P275	1121 aa	Known RBP	6.63	□□□□□ -1.35
CIT-213	ENST00000543324	GGA2	Q9UJY4	613 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	LSM7	Q9UK45	103 aa	Known RBP	6.63	□□□□□ -1.35
CIT-213	ENST00000543324	CLEC4E	Q9ULY5	219 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	SATB2	Q9UPW6	733 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	ANKRD6	Q9Y2G4	727 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	ZNF510	Q9Y2H8	683 aa		6.63	□□□□□ -1.35
CIT-213	ENST00000543324	HBS1L	Q9Y450	684 aa	Known RBP	6.63	□□□□□ -1.35
CIT-213	ENST00000543324	COL27A1	Q8IZC6	1860 aa	Predicted RBP	6.62	□□□□□ -1.35
CIT-213	ENST00000543324	PRRC2C	Q9Y520	2896 aa	Known RBP	6.62	□□□□□ -1.35
CIT-213	ENST00000543324		A0A1B0GTQ1	180 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	HEATR9	A2RTY3	570 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	TBC1D3B	A6NDS4	549 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	GOLGA8K	D6RF30	607 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	NPC1	O15118	1278 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	CS	O75390	466 aa	Known RBP	6.62	□□□□□ -1.35
CIT-213	ENST00000543324	IGLV3-25	P01717	112 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	RALA	P11233	206 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	HOXB2	P14652	356 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	CD1E	P15812	388 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	CKMT2	P17540	419 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	ACP1	P24666	158 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	CHKA	P35790	457 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	COPA	P53621	1224 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	E2F1	Q01094	437 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	EFEMP1	Q12805	493 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	NNT	Q13423	1086 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	EIF4H	Q15056	248 aa	Known RBP	6.62	□□□□□ -1.35
CIT-213	ENST00000543324	STIL	Q15468	1287 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	CNGA2	Q16280	664 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	ANO4	Q32M45	955 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	FAM133B	Q5BKY9	247 aa	Known RBP	6.62	□□□□□ -1.35
CIT-213	ENST00000543324	C3orf38	Q5JPI3	329 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	DCAF12L1	Q5VU92	463 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	TCERG1L	Q5VWI1	586 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	DPY19L2P1	Q6NXN4	242 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	BORA	Q6PGQ7	559 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	RAD9B	Q6WBX8	426 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	TPGS1	Q6ZTW0	290 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	BEND5	Q7L4P6	421 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	ZNF572	Q7Z3I7	529 aa	Predicted RBP	6.62	□□□□□ -1.35
CIT-213	ENST00000543324	GDF7	Q7Z4P5	450 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	SLC35F6	Q8N357	371 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	CADM4	Q8NFZ8	388 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	NELFB	Q8WX92	580 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	NDRG1	Q92597	394 aa	Known RBP	6.62	□□□□□ -1.35
CIT-213	ENST00000543324	MRGPRX1	Q96LB2	322 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	NT5C1B	Q96P26	610 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	XPO6	Q96QU8	1125 aa	Known RBP	6.62	□□□□□ -1.35
CIT-213	ENST00000543324	SLC2A11	Q9BYW1	496 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	DCLK3	Q9C098	648 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	DNAI2	Q9GZS0	605 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	NACA2	Q9H009	215 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	RUBCNL	Q9H714	662 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	LATS2	Q9NRM7	1088 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	THAP10	Q9P2Z0	257 aa	Predicted RBP	6.62	□□□□□ -1.35
CIT-213	ENST00000543324	RASAL2	Q9UJF2	1139 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	MYO6	Q9UM54	1294 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	PCDHGA8	Q9Y5G5	932 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	SLCO1B1	Q9Y6L6	691 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	FAM169A	Q9Y6X4	670 aa		6.62	□□□□□ -1.35
CIT-213	ENST00000543324	BICDL2	A1A5D9	508 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	GTPBP10	A4D1E9	387 aa	Known RBP	6.61	□□□□□ -1.35
CIT-213	ENST00000543324	EIF3H	O15372	352 aa	Known RBP eCLIP	6.61	□□□□□ -1.35
CIT-213	ENST00000543324	GNA14	O95837	355 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	LTF	P02788	710 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	BRD2	P25440	801 aa	Known RBP	6.61	□□□□□ -1.35
CIT-213	ENST00000543324	CD6	P30203	668 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	HLA-F	P30511	346 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	ARHGAP25	P42331	645 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	CTSK	P43235	329 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	GPD2	P43304	727 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	GRIA4	P48058	902 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	FNTA	P49354	379 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	SGSH	P51688	502 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	ADK	P55263	362 aa	Known RBP	6.61	□□□□□ -1.35
CIT-213	ENST00000543324	HDAC4	P56524	1084 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	KLRB1	Q12918	225 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	PAK1	Q13153	545 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	CAMK2G	Q13555	558 aa	Predicted RBP	6.61	□□□□□ -1.35
CIT-213	ENST00000543324	STIM1	Q13586	685 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	FUT11	Q495W5	492 aa		6.61	□□□□□ -1.35
CIT-213	ENST00000543324	ZNF569	Q5MCW4	686 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms