RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-210	ENST00000542817	TTC13	Q8NBP0	860 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CHST14	Q8NCH0	376 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CCNY	Q8ND76	341 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ARRDC2	Q8TBH0	407 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ISG20	Q96AZ6	181 aa	Known RBP	10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	TADA1	Q96BN2	335 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	PSKH2	Q96QS6	385 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	FAM129B	Q96TA1	746 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MGME1	Q9BQP7	344 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	TMEM121	Q9BTD3	319 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CEP44	Q9C0F1	390 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	TNKS2	Q9H2K2	1166 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	PRSS16	Q9NQE7	514 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CDC23	Q9UJX2	597 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	DRG1	Q9Y295	367 aa	Known RBP	10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	SIT1	Q9Y3P8	196 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	SHROOM3	Q8TF72	1996 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817	DNAH14	Q0VDD8	3507 aa		10.85	□□□□□ -0.67
NPIPB3-210	ENST00000542817		H7C0C1	242 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	PPP1R12A	O14974	1030 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	NPC1	O15118	1278 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ZBTB24	O43167	697 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ITGAV	P06756	1048 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ETS1	P14921	441 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	NTSR1	P30989	418 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	GK	P32189	559 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	COIL	P38432	576 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	PTGIR	P43119	386 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ATP5O	P48047	213 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MAX	P61244	160 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MTAP	Q13126	283 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CAMK2G	Q13555	558 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	BYSL	Q13895	437 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	RFTN1	Q14699	578 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	FNDC3B	Q53EP0	1204 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	TEX44	Q53QW1	395 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MAMSTR	Q6ZN01	415 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	DPY19L3	Q6ZPD9	716 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	KLHDC8B	Q8IXV7	354 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	PLPP6	Q8IY26	295 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ZNF567	Q8N184	647 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	TMEM105	Q8N8V8	129 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	FAM71D	Q8N9W8	422 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	FLCN	Q8NFG4	579 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	HTR3C	Q8WXA8	447 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CASKIN2	Q8WXE0	1202 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ZNF592	Q92610	1267 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ERLEC1	Q96DZ1	483 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	EXOC2	Q96KP1	924 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	TEKT5	Q96M29	485 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	SP110	Q9HB58	689 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	RBM22	Q9NW64	420 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	RNF14	Q9UBS8	474 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	SLC25A13	Q9UJS0	675 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	SARDH	Q9UL12	918 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MMP17	Q9ULZ9	603 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	HPCAL4	Q9UM19	191 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	PLA2G4C	Q9UP65	541 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MRPS17	Q9Y2R5	130 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	WASF2	Q9Y6W5	498 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CACNA1H	O95180	2353 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	C5orf60	A6NFR6	353 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	KRIT1	O00522	736 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MCF2L	O15068	1137 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	URI1	O94763	535 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ZSCAN5DP	P0CG00	497 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	TDGF1	P13385	188 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MMP13	P45452	471 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CLCN5	P51795	746 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	METAP1	P53582	386 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	GABPB1	Q06547	395 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	LRRC32	Q14392	662 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CRY1	Q16526	586 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	HSF5	Q4G112	596 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CCDC181	Q5TID7	509 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MARC1	Q5VT66	337 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	TIGD7	Q6NT04	549 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	DARS2	Q6PI48	645 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	SERPINA13P	Q6UXR4	307 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	SYT13	Q7L8C5	426 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	PRPF39	Q86UA1	669 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	ZNF354C	Q86Y25	554 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CDKL3	Q8IVW4	592 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	CHPF	Q8IZ52	775 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	PCDH20	Q8N6Y1	951 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	LRRN4CL	Q8ND94	238 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	SPATA4	Q8NEY3	305 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	KIF18A	Q8NI77	898 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	UCMA	Q8WVF2	138 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	EXOC4	Q96A65	974 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MAGOHB	Q96A72	148 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	TM6SF2	Q9BZW4	377 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	MKRN2	Q9H000	416 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	DDX47	Q9H0S4	455 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	SLC6A17	Q9H1V8	727 aa		10.84	□□□□□ -0.67
NPIPB3-210	ENST00000542817	L2HGDH	Q9H9P8	463 aa		10.84	□□□□□ -0.67

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