RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 DDX43Q9NXZ2 648 aaKnown RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 CCPG1Q9ULG6 757 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 SCAF8Q9UPN6 1271 aaKnown RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 SNX9Q9Y5X1 595 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 RGPD2P0DJD1 1756 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 PKD1L3Q7Z443 1732 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 TIAM2Q8IVF5 1701 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 ZNF609O15014 1411 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 NID2Q14112 1375 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 ZMYM6O95789 1325 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 SPATA31A3Q5VYP0 1347 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 A0A088AWK7 358 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 IQANK1A0A1B0GTG1 560 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 WDR27A2RRH5 827 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 TRIM64CA6NLI5 447 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 KMOO15229 486 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 HNRNPRO43390 633 aaKnown RBP6.07□□□□□ -1.44
XRCC4-206ENST00000542685 KRT86O43790 486 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 PPP6R2O75170 966 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 SERPINB7O75635 380 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 ZBED1O96006 694 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 LDHAP00338 332 aaKnown RBP6.07□□□□□ -1.44
XRCC4-206ENST00000542685 TPBGLP0DKB5 382 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 NR2F6P10588 404 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 CYP2C9P11712 490 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 CPA1P15085 419 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 ZNF18P17022 549 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 CMA1P23946 247 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 HOXC9P31274 260 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 ACADSBP45954 432 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 PIP4K2AP48426 406 aaPredicted RBP6.07□□□□□ -1.44
XRCC4-206ENST00000542685 RASSF2P50749 326 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 PDE6CP51160 858 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 DMPKQ09013 629 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 BNIP1Q12981 228 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 IKQ13123 557 aaPredicted RBP6.07□□□□□ -1.44
XRCC4-206ENST00000542685 KIF22Q14807 665 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 IMMTQ16891 758 aaKnown RBP6.07□□□□□ -1.44
XRCC4-206ENST00000542685 FAM153CQ494X1 144 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 ERMARDQ5T6L9 678 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 RNF220Q5VTB9 566 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 KSR2Q6VAB6 950 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 TBC1D1Q86TI0 1168 aaPredicted RBP6.07□□□□□ -1.44
XRCC4-206ENST00000542685 SH2D3CQ8N5H7 860 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 NAT14Q8WUY8 206 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 MED30Q96HR3 178 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 ZNF333Q96JL9 665 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 PBKQ96KB5 322 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 USP28Q96RU2 1077 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 ACTRT3Q9BYD9 372 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 KLHL4Q9C0H6 718 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 STMN4Q9H169 189 aaPredicted RBP6.07□□□□□ -1.44
XRCC4-206ENST00000542685 HSD3B7Q9H2F3 369 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 AS3MTQ9HBK9 375 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 GPR35Q9HC97 309 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 GPR108Q9NPR9 543 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 LZTFL1Q9NQ48 299 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 PPANQ9NQ55 473 aaKnown RBP6.07□□□□□ -1.44
XRCC4-206ENST00000542685 PFDN4Q9NQP4 134 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 GDF3Q9NR23 364 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 INIPQ9NRY2 104 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 CRNNQ9UBG3 495 aaPredicted RBP6.07□□□□□ -1.44
XRCC4-206ENST00000542685 AGAP1Q9UPQ3 857 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 HPSEQ9Y251 543 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 HBS1LQ9Y450 684 aaKnown RBP6.07□□□□□ -1.44
XRCC4-206ENST00000542685 WNT6Q9Y6F9 365 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 CHD4Q14839 1912 aa6.07□□□□□ -1.44
XRCC4-206ENST00000542685 TNRQ92752 1358 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 UBR2Q8IWV8 1755 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 ARAP2Q8WZ64 1704 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PI4KAP2A4QPH2 592 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PABPN1LA6NDY0 278 aaKnown RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 MANSC4A6NHS7 340 aaPredicted RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 ZNF233A6NK53 670 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 E9PBE3 544 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 H0YC42 278 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 GRM8O00222 908 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 DTNBO60941 627 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 ARIH2O95376 493 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 DDX58O95786 925 aaKnown RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 GNA14O95837 355 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 TTLL1O95922 423 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 CHEK2O96017 543 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 FTH1P19P0C7X4 201 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 RARBP10826 455 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 RXRAP19793 462 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 ITGALP20701 1170 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 RECQLP46063 649 aaPredicted RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 TMED10P49755 219 aaKnown RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 MXI1P50539 228 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 TUBP50607 506 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 FXR1P51114 621 aaKnown RBP eCLIP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 RAD23BP54727 409 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 TPD52P55327 224 aaPredicted RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 DR1Q01658 176 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 SRSF4Q08170 494 aaKnown RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 HSPA14Q0VDF9 509 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 NOGQ13253 232 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 CUL1Q13616 776 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms