RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 RARAP10276 462 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 ERCC2P18074 760 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 RECQLP46063 649 aaPredicted RBP15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 AFF3P51826 1226 aaKnown RBP15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 CCNHP51946 323 aaPredicted RBP15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 POM121L1PQ3SYA9 428 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 PPP6R3Q5H9R7 873 aaPredicted RBP15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 KCNT1Q5JUK3 1230 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 PIP5KL1Q5T9C9 394 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 TXNRD3NBQ6F5E7 133 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 LEKR1Q6ZMV7 388 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 H2AFVQ71UI9 128 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 GAS2L3Q86XJ1 694 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 ARHGAP12Q8IWW6 846 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 ZNF564Q8TBZ8 553 aaPredicted RBP15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 CTNNBL1Q8WYA6 563 aaPredicted RBP15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 ARRDC3Q96B67 414 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 HEPHQ9BQS7 1158 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 HDAC8Q9BY41 377 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 ZDHHC5Q9C0B5 715 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 PDFQ9HBH1 243 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 TM9SF3Q9HD45 589 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 NCOR2Q9Y618 2525 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 KNL1Q8NG31 2342 aa15.73■□□□□ 0.11
ECHDC2-223ENST00000542552 A0A1W2PPC4 97 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 KPNA3O00505 521 aaPredicted RBP15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 BUB1O43683 1085 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 AKR1B10O60218 316 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 LEFTY1O75610 366 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 GJB3O75712 270 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 PROSCO94903 275 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 MAPK8P45983 427 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 FOXK2Q01167 660 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 GRIK2Q13002 908 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 POLNQ7Z5Q5 900 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 TC2NQ8N9U0 490 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 OR2AP1Q8NGE2 309 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 FAM71BQ8TC56 605 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 GRIN3AQ8TCU5 1115 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 SNX19Q92543 992 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 TSC1Q92574 1164 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 CCDC42Q96M95 316 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 SLC39A8Q9C0K1 460 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 DEF6Q9H4E7 631 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 ZWILCHQ9H900 591 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 DNAAF2Q9NVR5 837 aaKnown RBP15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 CTTNBP2NLQ9P2B4 639 aa15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 HECAQ9UBI9 543 aaPredicted RBP15.72■□□□□ 0.11
ECHDC2-223ENST00000542552 DOCK9Q9BZ29 2069 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TBC1D3DA0A087WVF3 549 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TBC1D3IA0A087WXS9 549 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TBC1D3EA0A087X179 549 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TBC1D3KA0A087X1G2 549 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TBC1D3FA6NER0 549 aaPredicted RBP15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 UPK3BL1B0FP48 263 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TBC1D3LB9A6J9 549 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 UPK3BL2E5RIL1 263 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 DAPK3O43293 454 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 PRAMEF11O60813 436 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TMCC1O94876 653 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TBC1D3HP0C7X1 549 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 ITGB7P26010 798 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 GRIA4P48058 902 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 CSNK1EP49674 416 aaKnown RBP15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 PAPOLAP51003 745 aaKnown RBP15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 DNA2P51530 1060 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 ZNF75DP51815 510 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 PPP2CBP62714 309 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 PPP2CAP67775 309 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 SMTNL2Q2TAL5 461 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 MYLK3Q32MK0 819 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TBC1D3GQ6DHY5 549 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TBC1D3CQ6IPX1 549 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 ERN2Q76MJ5 926 aaKnown RBP15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TRIM69Q86WT6 500 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 CPNE8Q86YQ8 564 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TBC1D3Q8IZP1 549 aaPredicted RBP15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 MINDY1Q8N5J2 469 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 NPWQ8N729 165 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 OR2I1PQ8NGU4 316 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 HSPH1Q92598 858 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 MRFAP1L1Q96HT8 127 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 CELF6Q96J87 481 aaKnown RBP15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 LRIG1Q96JA1 1093 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 GTPBP2Q9BX10 602 aaKnown RBP15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 TM6SF2Q9BZW4 377 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 PREBQ9HCU5 417 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 SPTLC3Q9NUV7 552 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 LCMT1Q9UIC8 334 aa15.71■□□□□ 0.11
ECHDC2-223ENST00000542552 ARHGAP42A6NI28 874 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 H3BRJ5 948 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 J3KR12 359 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 MTA2O94776 668 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 POP4O95707 220 aaKnown RBP15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 IL4RP24394 825 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 ARSEP51690 589 aa15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 ATXN3P54252 364 aaPredicted RBP15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 SNRPD1P62314 119 aaKnown RBP15.7■□□□□ 0.1
ECHDC2-223ENST00000542552 RACK1P63244 317 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms