RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 DRC3Q9H069 523 aa16.31■□□□□ 0.2
VARS2-212ENST00000542001 BEST1O76090 585 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 PYGLP06737 847 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 PIK3R1P27986 724 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 CRHR1P34998 444 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 ALDH7A1P49419 539 aaKnown RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 SERPINH1P50454 418 aaKnown RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 NR6A1Q15406 480 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 STRADAQ7RTN6 431 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 SH3GL3Q99963 347 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 MTG1Q9BT17 334 aaPredicted RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 NMRK2Q9NPI5 230 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 MORF4L1Q9UBU8 362 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 CRLS1Q9UJA2 301 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 PCDHB7Q9Y5E2 793 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 TRPV2Q9Y5S1 764 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 MAP1BP46821 2468 aaKnown RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 STX16-NPEPL1H3BU86 382 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 PTPN3P26045 913 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 GRIA3P42263 894 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 ABL2P42684 1182 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 OXCT1P55809 520 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 SLC10A2Q12908 348 aaPredicted RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 PCID2Q5JVF3 399 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 TBCELQ5QJ74 424 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 NAT14Q8WUY8 206 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 MTFMTQ96DP5 389 aaKnown RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 SNX27Q96L92 541 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 TBCDQ9BTW9 1192 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 STYXL1Q9Y6J8 313 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 PQBP1O60828 265 aaKnown RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 YWHAQP27348 245 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 PIK3CGP48736 1102 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 CAND1Q86VP6 1230 aaKnown RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 ARFGAP1Q8N6T3 406 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 QKIQ96PU8 341 aaKnown RBP eCLIP16.3■□□□□ 0.2
VARS2-212ENST00000542001 PSMD12O00232 456 aaPredicted RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 PRKCGP05129 697 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 RHOCP08134 193 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 TKTP29401 623 aaKnown RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 SKIV2L2P42285 1042 aaKnown RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 IRX1P78414 480 aaPredicted RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 SEMG2Q02383 582 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 RIPK1Q13546 671 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 PPM1LQ5SGD2 360 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 LRRC8BQ6P9F7 803 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 SETD3Q86TU7 594 aaPredicted RBP16.3■□□□□ 0.2
VARS2-212ENST00000542001 OSTM1Q86WC4 334 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 CACUL1Q86Y37 369 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 TREML1Q86YW5 311 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 DDI1Q8WTU0 396 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 PPP2R3CQ969Q6 453 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 CXCL16Q9H2A7 254 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 SLC7A8Q9UHI5 535 aa16.3■□□□□ 0.2
VARS2-212ENST00000542001 KIAA0100Q14667 2235 aaKnown RBP16.29■□□□□ 0.2
VARS2-212ENST00000542001 A0A1W2PQH9 124 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 MAGEB16A2A368 324 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 FAM72CH0Y354 149 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 FKBP9O95302 570 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 LRPAP1P30533 357 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 FAM72AQ5TYM5 149 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 NCBP2-AS2Q69YL0 99 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 FAM72DQ6L9T8 149 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 TIGD7Q6NT04 549 aaPredicted RBP16.29■□□□□ 0.2
VARS2-212ENST00000542001 FKBP9P1Q75LS8 142 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 FAM72BQ86X60 149 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 SLC4A5Q9BY07 1137 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 WWOXQ9NZC7 414 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 PDP2Q9P2J9 529 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 ZNF212Q9UDV6 495 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 ATXN2Q99700 1313 aaKnown RBP16.29■□□□□ 0.2
VARS2-212ENST00000542001 ARHGAP10A1A4S6 786 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 C2orf81A6NN90 581 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 RBP1P09455 135 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 MBL2P11226 248 aaPredicted RBP16.29■□□□□ 0.2
VARS2-212ENST00000542001 PCNAP12004 261 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 PEX2P28328 305 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 MRPS6P82932 125 aaKnown RBP16.29■□□□□ 0.2
VARS2-212ENST00000542001 DSC2Q02487 901 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 WASHC5Q12768 1159 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 MAP2K5Q13163 448 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 PHTF2Q8N3S3 785 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 ZNF398Q8TD17 642 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 PADI3Q9ULW8 664 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 HEATR9A2RTY3 570 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 FFAR3O14843 346 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 GPR42O15529 346 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 TYROBPO43914 113 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 SLC2A3P11169 496 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 PPARGP37231 505 aaPredicted RBP16.29■□□□□ 0.2
VARS2-212ENST00000542001 ARHGEF7Q14155 803 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 ZIK1Q3SY52 487 aaPredicted RBP16.29■□□□□ 0.2
VARS2-212ENST00000542001 C16orf87Q6PH81 154 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 DHDDSQ86SQ9 333 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.29■□□□□ 0.2
VARS2-212ENST00000542001 FBXO39Q8N4B4 442 aa16.29■□□□□ 0.2
VARS2-212ENST00000542001 FNDC5Q8NAU1 212 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms