RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 CXCR3P49682 368 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 SLC20A2Q08357 652 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 ALFQ53S48 1182 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 ZNF542PQ5EBM4 170 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 C3orf38Q5JPI3 329 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 OR6B2Q6IFH4 312 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 KLHL10Q6JEL2 608 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 INO80CQ6PI98 192 aaPredicted RBP27.36■■□□□ 1.97
CHFR-218ENST00000540963 ZNF783Q6ZMS7 281 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 DPY19L3Q6ZPD9 716 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 FAM183BPQ6ZVS7 135 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 WDR48Q8TAF3 677 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 MED8Q96G25 268 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 C1orf74Q96LT6 269 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 SEMA4CQ9C0C4 833 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 WDCPQ9H6R7 721 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 MAN1B1Q9UKM7 699 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 RP1P56715 2156 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 BECN2A8MW95 431 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 PPP1R3GB7ZBB8 358 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 ADRB3P13945 408 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 SLC6A3Q01959 620 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 FGL2Q14314 439 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 RETSATQ6NUM9 610 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 LRRC31Q6UY01 552 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 RBM44Q6ZP01 1051 aaKnown RBP27.35■■□□□ 1.97
CHFR-218ENST00000540963 ZDHHC17Q8IUH5 632 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 GRIN3AQ8TCU5 1115 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 BTN2A2Q8WVV5 523 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 ASB12Q8WXK4 309 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 PGAP3Q96FM1 320 aaPredicted RBP27.35■■□□□ 1.97
CHFR-218ENST00000540963 NPY6RQ99463 290 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 TKTL2Q9H0I9 626 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 PIGVQ9NUD9 493 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 ENTPD2Q9Y5L3 495 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 FADS3Q9Y5Q0 445 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 WASF2Q9Y6W5 498 aa27.35■■□□□ 1.97
CHFR-218ENST00000540963 IGLV3-10A0A075B6K4 115 aa27.34■■□□□ 1.97
CHFR-218ENST00000540963 CXorf51AA0A1B0GTR3 108 aa27.34■■□□□ 1.97
CHFR-218ENST00000540963 CDRT15L2A8MXV6 281 aa27.34■■□□□ 1.97
CHFR-218ENST00000540963 RNF103O00237 685 aa27.34■■□□□ 1.97
CHFR-218ENST00000540963 AQP9O43315 295 aa27.34■■□□□ 1.97
CHFR-218ENST00000540963 PAK4O96013 591 aaPredicted RBP27.34■■□□□ 1.97
CHFR-218ENST00000540963 F9P00740 461 aa27.34■■□□□ 1.97
CHFR-218ENST00000540963 L1CAMP32004 1257 aa27.34■■□□□ 1.97
CHFR-218ENST00000540963 CDKN3Q16667 212 aa27.34■■□□□ 1.97
CHFR-218ENST00000540963 TRIM65Q6PJ69 517 aa27.34■■□□□ 1.97
CHFR-218ENST00000540963 PCDH20Q8N6Y1 951 aaKnown RBP27.34■■□□□ 1.97
CHFR-218ENST00000540963 C1orf131Q8NDD1 294 aaKnown RBP27.34■■□□□ 1.97
CHFR-218ENST00000540963 IPO11Q9UI26 975 aaKnown RBP27.34■■□□□ 1.97
CHFR-218ENST00000540963 MAST4O15021 2626 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 A0A0D9SEW6 157 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 ILVBLA1L0T0 632 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 FPGTO14772 594 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 ZNF821O75541 412 aaPredicted RBP27.33■■□□□ 1.97
CHFR-218ENST00000540963 ADCY5O95622 1261 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 MAPK8IP2Q13387 824 aaPredicted RBP27.33■■□□□ 1.97
CHFR-218ENST00000540963 LY6DQ14210 128 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 OTUD1Q5VV17 481 aaPredicted RBP27.33■■□□□ 1.97
CHFR-218ENST00000540963 ISM2Q6H9L7 571 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 GUSBP11Q6P575 273 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 EFL1Q7Z2Z2 1120 aaKnown RBP27.33■■□□□ 1.97
CHFR-218ENST00000540963 ARL14Q8N4G2 192 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 DENND6BQ8NEG7 585 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 SHC3Q92529 594 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 GLMNQ92990 594 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 NT5C3BQ969T7 300 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 RAB7BQ96AH8 199 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 ATXN7L3BQ96GX2 97 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 PRR11Q96HE9 360 aaPredicted RBP27.33■■□□□ 1.97
CHFR-218ENST00000540963 TBATAQ96M53 351 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 IL12RB2Q99665 862 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 HEPHQ9BQS7 1158 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 C1QTNF2Q9BXJ5 285 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 TNKS2Q9H2K2 1166 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 CLMPQ9H6B4 373 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 CAAP1Q9H8G2 361 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 STAP1Q9ULZ2 295 aa27.33■■□□□ 1.97
CHFR-218ENST00000540963 A0A1W2PNU3 283 aaPredicted RBP27.32■■□□□ 1.96
CHFR-218ENST00000540963 CPED1A4D0V7 1026 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 ERBB2P04626 1255 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 OR1E1P30953 314 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 RPIAP49247 311 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 SERPINH1P50454 418 aaKnown RBP27.32■■□□□ 1.96
CHFR-218ENST00000540963 SGCGQ13326 291 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 NR0B2Q15466 257 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 LINGO4Q6UY18 593 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 CLEC14AQ86T13 490 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 PLPP6Q8IY26 295 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 NAT6Q93015 286 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 KLF6Q99612 283 aaPredicted RBP27.32■■□□□ 1.96
CHFR-218ENST00000540963 BOCQ9BWV1 1114 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 APEX2Q9UBZ4 518 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 KIF26BQ2KJY2 2108 aa27.32■■□□□ 1.96
CHFR-218ENST00000540963 RAD51BO15315 384 aa27.31■■□□□ 1.96
CHFR-218ENST00000540963 TSPAN6O43657 245 aa27.31■■□□□ 1.96
CHFR-218ENST00000540963 FGFR1OPO95684 399 aaKnown RBP27.31■■□□□ 1.96
CHFR-218ENST00000540963 JUNDP17535 347 aa27.31■■□□□ 1.96
CHFR-218ENST00000540963 BMP6P22004 513 aa27.31■■□□□ 1.96
CHFR-218ENST00000540963 USP8P40818 1118 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms