RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CDRT15L2A8MXV6 281 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 WNT9AO14904 365 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 RNASEH1O60930 286 aaKnown RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 PPFIA2O75334 1257 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 GJB6O95452 261 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 KLKB1P03952 638 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 RARGP13631 454 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 NUDT1P36639 197 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 UBA7P41226 1012 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 HARS2P49590 506 aaKnown RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 DUSP3P51452 185 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 ANAPC15P60006 121 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 TNNC1P63316 161 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 COG7P83436 770 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 DHX8Q14562 1220 aaKnown RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 ISXQ2M1V0 245 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 WDR72Q3MJ13 1102 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 C10orf120Q5SQS8 335 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 ARL6IP4Q66PJ3 421 aaKnown RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 NAPEPLDQ6IQ20 393 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 USP53Q70EK8 1073 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 TRAPPC11Q7Z392 1133 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 CLEC14AQ86T13 490 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 WDR49Q8IV35 697 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 GPD1LQ8N335 351 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 SLC25A45Q8N413 288 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 CPXM2Q8N436 756 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 ARL14Q8N4G2 192 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 FAM26EQ8N5C1 309 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 FAM169BQ8N8A8 192 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 ZMIZ2Q8NF64 920 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 OR4C6Q8NH72 309 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 DDI1Q8WTU0 396 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 RAD54LQ92698 747 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 ANAPC16Q96DE5 110 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 SGF29Q96ES7 293 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 CALML4Q96GE6 196 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 PRR11Q96HE9 360 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 SEC16BQ96JE7 1060 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 SERAC1Q96JX3 654 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 TNIP3Q96KP6 325 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 SPATA32Q96LK8 384 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 CDK5RAP1Q96SZ6 601 aaKnown RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 LLPHQ9BRT6 129 aaKnown RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 CBWD1Q9BRT8 395 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 SRRTQ9BXP5 876 aaKnown RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 ABCG4Q9H172 646 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 RSPH9Q9H1X1 276 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 CSNK1G1Q9HCP0 422 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 BLOC1S4Q9NUP1 217 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 OSER1Q9NX31 292 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 FBXL12Q9NXK8 326 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 HSPBP1Q9NZL4 362 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 AGO1Q9UL18 857 aaKnown RBP4.79□□□□□ -1.64
SNHG1-214ENST00000540865 FZD4Q9ULV1 537 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 CLEC4EQ9ULY5 219 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 PAXBP1Q9Y5B6 917 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 C2CD3Q4AC94 2353 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 MYOFQ9NZM1 2061 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 POLQO75417 2590 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 A0A1W2PNU3 283 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-214ENST00000540865 VWA3AA6NCI4 1184 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 RGS13O14921 159 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 MDM4O15151 490 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 LATO43561 262 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 ATP5BP06576 529 aaKnown RBP4.78□□□□□ -1.64
SNHG1-214ENST00000540865 DLDP09622 509 aaKnown RBP4.78□□□□□ -1.64
SNHG1-214ENST00000540865 ALPPL2P10696 532 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 RALAP11233 206 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 GOT1P17174 413 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 GAP43P17677 238 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 DGKAP23743 735 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 HLA-FP30511 346 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 CORO1AP31146 461 aaKnown RBP4.78□□□□□ -1.64
SNHG1-214ENST00000540865 ATICP31939 592 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 DDIT3P35638 169 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 AFMP43652 599 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 ZNF445P59923 1031 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 HMGN5P82970 282 aaKnown RBP4.78□□□□□ -1.64
SNHG1-214ENST00000540865 ALCAMQ13740 583 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 KCNJ12Q14500 433 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 CST6Q15828 149 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 MSMPQ1L6U9 139 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 ZSCAN23Q3MJ62 389 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 MPPE1Q53F39 396 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 RILPL1Q5EBL4 403 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 C3orf38Q5JPI3 329 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 SFRP5Q5T4F7 317 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 KIAA0907Q7Z7F0 614 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-214ENST00000540865 ADIPOR2Q86V24 386 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 SFR1Q86XK3 245 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 FAM217AQ8IXS0 508 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 SYCP3Q8IZU3 236 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 FUKQ8N0W3 1084 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 AHI1Q8N157 1196 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 ZNF366Q8N895 744 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 MAPK15Q8TD08 544 aa4.78□□□□□ -1.64
SNHG1-214ENST00000540865 EXTL1Q92935 676 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms