RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TTC30AQ86WT1 665 aa8.81□□□□□ -1
DDB1-217ENST00000540166 ZCCHC7Q8N3Z6 543 aaKnown RBP8.81□□□□□ -1
DDB1-217ENST00000540166 KATNBL1Q9H079 304 aa8.81□□□□□ -1
DDB1-217ENST00000540166 AVENQ9NQS1 362 aaPredicted RBP8.81□□□□□ -1
DDB1-217ENST00000540166 COL1A2P08123 1366 aa8.81□□□□□ -1
DDB1-217ENST00000540166 A0A1W2PPW3 197 aa8.81□□□□□ -1
DDB1-217ENST00000540166 TCRBV9S1A1TA0A576 114 aa8.81□□□□□ -1
DDB1-217ENST00000540166 KPNA7A9QM74 516 aa8.81□□□□□ -1
DDB1-217ENST00000540166 ASNA1O43681 348 aa8.81□□□□□ -1
DDB1-217ENST00000540166 APRTP07741 180 aa8.81□□□□□ -1
DDB1-217ENST00000540166 COL6A2P12110 1019 aa8.81□□□□□ -1
DDB1-217ENST00000540166 OSTNP61366 133 aa8.81□□□□□ -1
DDB1-217ENST00000540166 TUBA4AP68366 448 aa8.81□□□□□ -1
DDB1-217ENST00000540166 CYP24A1Q07973 514 aa8.81□□□□□ -1
DDB1-217ENST00000540166 PPP2R5DQ14738 602 aa8.81□□□□□ -1
DDB1-217ENST00000540166 EMC2Q15006 297 aa8.81□□□□□ -1
DDB1-217ENST00000540166 TGFBIQ15582 683 aa8.81□□□□□ -1
DDB1-217ENST00000540166 ZBED5Q49AG3 693 aa8.81□□□□□ -1
DDB1-217ENST00000540166 KCNT1Q5JUK3 1230 aa8.81□□□□□ -1
DDB1-217ENST00000540166 RNASEH2BQ5TBB1 312 aaKnown RBP8.81□□□□□ -1
DDB1-217ENST00000540166 SCARA3Q6AZY7 606 aa8.81□□□□□ -1
DDB1-217ENST00000540166 ARCQ7LC44 396 aa8.81□□□□□ -1
DDB1-217ENST00000540166 ZNF677Q86XU0 584 aa8.81□□□□□ -1
DDB1-217ENST00000540166 POF1BQ8WVV4 589 aa8.81□□□□□ -1
DDB1-217ENST00000540166 ISOC1Q96CN7 298 aa8.81□□□□□ -1
DDB1-217ENST00000540166 SYT11Q9BT88 431 aa8.81□□□□□ -1
DDB1-217ENST00000540166 CCDC106Q9BWC9 280 aa8.81□□□□□ -1
DDB1-217ENST00000540166 POLR3FQ9H1D9 316 aaPredicted RBP8.81□□□□□ -1
DDB1-217ENST00000540166 STN1Q9H668 368 aaKnown RBP8.81□□□□□ -1
DDB1-217ENST00000540166 CYP26B1Q9NR63 512 aa8.81□□□□□ -1
DDB1-217ENST00000540166 RBAKQ9NYW8 714 aaPredicted RBP8.81□□□□□ -1
DDB1-217ENST00000540166 SAE1Q9UBE0 346 aaPredicted RBP8.81□□□□□ -1
DDB1-217ENST00000540166 FETUBQ9UGM5 382 aa8.81□□□□□ -1
DDB1-217ENST00000540166 CAPN14A8MX76 684 aa8.81□□□□□ -1
DDB1-217ENST00000540166 KLF11O14901 512 aa8.81□□□□□ -1
DDB1-217ENST00000540166 TPST1O60507 370 aa8.81□□□□□ -1
DDB1-217ENST00000540166 NBNO60934 754 aa8.81□□□□□ -1
DDB1-217ENST00000540166 SERPINE1P05121 402 aa8.81□□□□□ -1
DDB1-217ENST00000540166 CALB1P05937 261 aa8.81□□□□□ -1
DDB1-217ENST00000540166 ALOX5P09917 674 aa8.81□□□□□ -1
DDB1-217ENST00000540166 NAT1P18440 290 aa8.81□□□□□ -1
DDB1-217ENST00000540166 GPC3P51654 580 aa8.81□□□□□ -1
DDB1-217ENST00000540166 ROR1Q01973 937 aa8.81□□□□□ -1
DDB1-217ENST00000540166 FAM91A1Q658Y4 838 aa8.81□□□□□ -1
DDB1-217ENST00000540166 C16orf46Q6P387 395 aa8.81□□□□□ -1
DDB1-217ENST00000540166 HEATR4Q86WZ0 1026 aa8.81□□□□□ -1
DDB1-217ENST00000540166 SLC44A1Q8WWI5 657 aa8.81□□□□□ -1
DDB1-217ENST00000540166 SCYL1Q96KG9 808 aa8.81□□□□□ -1
DDB1-217ENST00000540166 RIPOR3Q96MK2 946 aa8.81□□□□□ -1
DDB1-217ENST00000540166 TCF25Q9BQ70 676 aa8.81□□□□□ -1
DDB1-217ENST00000540166 PCDH12Q9NPG4 1184 aa8.81□□□□□ -1
DDB1-217ENST00000540166 MAN1C1Q9NR34 630 aa8.81□□□□□ -1
DDB1-217ENST00000540166 PLA2G4CQ9UP65 541 aa8.81□□□□□ -1
DDB1-217ENST00000540166 DRG1Q9Y295 367 aaKnown RBP8.81□□□□□ -1
DDB1-217ENST00000540166 YBX2Q9Y2T7 364 aaKnown RBP8.81□□□□□ -1
DDB1-217ENST00000540166 SAC3D1A6NKF1 404 aa8.8□□□□□ -1
DDB1-217ENST00000540166 E5RJQ4 531 aa8.8□□□□□ -1
DDB1-217ENST00000540166 M0R3G1 203 aa8.8□□□□□ -1
DDB1-217ENST00000540166 BPGMP07738 259 aa8.8□□□□□ -1
DDB1-217ENST00000540166 RALBP11234 206 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SERPINB10P48595 397 aa8.8□□□□□ -1
DDB1-217ENST00000540166 GPX6P59796 221 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SNRPFP62306 86 aaKnown RBP8.8□□□□□ -1
DDB1-217ENST00000540166 TFAMQ00059 246 aaKnown RBP8.8□□□□□ -1
DDB1-217ENST00000540166 GTF2BQ00403 316 aa8.8□□□□□ -1
DDB1-217ENST00000540166 TAP1Q03518 808 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SMAD1Q15797 465 aaKnown RBP8.8□□□□□ -1
DDB1-217ENST00000540166 DCAF6Q58WW2 860 aa8.8□□□□□ -1
DDB1-217ENST00000540166 PTAR1Q7Z6K3 402 aaPredicted RBP8.8□□□□□ -1
DDB1-217ENST00000540166 GLIS1Q8NBF1 620 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SUN5Q8TC36 379 aa8.8□□□□□ -1
DDB1-217ENST00000540166 TMC2Q8TDI7 906 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
DDB1-217ENST00000540166 ADNPQ9H2P0 1102 aa8.8□□□□□ -1
DDB1-217ENST00000540166 TPK1Q9H3S4 243 aa8.8□□□□□ -1
DDB1-217ENST00000540166 UBE2ZQ9H832 354 aaPredicted RBP8.8□□□□□ -1
DDB1-217ENST00000540166 TCF7L2Q9NQB0 619 aa8.8□□□□□ -1
DDB1-217ENST00000540166 MRPL17Q9NRX2 175 aaKnown RBP8.8□□□□□ -1
DDB1-217ENST00000540166 NUMBLQ9Y6R0 609 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SF3B1O75533 1304 aaKnown RBP eCLIP8.8□□□□□ -14e-6■■■■■ 100.6
DDB1-217ENST00000540166 LINC01553A4QN01 128 aa8.8□□□□□ -1
DDB1-217ENST00000540166 CLOCKO15516 846 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SORBS2O94875 1100 aaKnown RBP8.8□□□□□ -1
DDB1-217ENST00000540166 POMCP01189 267 aa8.8□□□□□ -1
DDB1-217ENST00000540166 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
DDB1-217ENST00000540166 ITGAXP20702 1163 aa8.8□□□□□ -1
DDB1-217ENST00000540166 IL10P22301 178 aa8.8□□□□□ -1
DDB1-217ENST00000540166 GCAP28676 217 aa8.8□□□□□ -1
DDB1-217ENST00000540166 GK3PQ14409 553 aa8.8□□□□□ -1
DDB1-217ENST00000540166 MOGQ16653 247 aa8.8□□□□□ -1
DDB1-217ENST00000540166 SEZ6Q53EL9 994 aa8.8□□□□□ -1
DDB1-217ENST00000540166 DEPDC1Q5TB30 811 aa8.8□□□□□ -1
DDB1-217ENST00000540166 ADCK1Q86TW2 530 aa8.8□□□□□ -1
DDB1-217ENST00000540166 AFAP1L2Q8N4X5 818 aa8.8□□□□□ -1
DDB1-217ENST00000540166 HM13Q8TCT9 377 aa8.8□□□□□ -1
DDB1-217ENST00000540166 FNIP1Q8TF40 1166 aa8.8□□□□□ -1
DDB1-217ENST00000540166 CNDP1Q96KN2 507 aa8.8□□□□□ -1
DDB1-217ENST00000540166 DACH2Q96NX9 599 aa8.8□□□□□ -1
DDB1-217ENST00000540166 RTKNQ9BST9 563 aa8.8□□□□□ -1
DDB1-217ENST00000540166 CCDC90BQ9GZT6 254 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms