RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 AMNQ9BXJ7 453 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 KRT23Q9C075 422 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 REXO4Q9GZR2 422 aaKnown RBP3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 VPS16Q9H269 839 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 MRPL44Q9H9J2 332 aaKnown RBP3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 VEZTQ9HBM0 779 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 IL1RAPL2Q9NP60 686 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 ARHGEF3Q9NR81 526 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 ZBTB40Q9NUA8 1239 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 GIMAP4Q9NUV9 329 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 ANO10Q9NW15 660 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 DDX43Q9NXZ2 648 aaKnown RBP3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 IL19Q9UHD0 177 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 AJAP1Q9UKB5 411 aaPredicted RBP3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 CFAP45Q9UL16 551 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 ZMYND8Q9ULU4 1186 aaPredicted RBP3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 PIN4Q9Y237 131 aaKnown RBP3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 BTBD3Q9Y2F9 522 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 REXO2Q9Y3B8 237 aaKnown RBP3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 SQORQ9Y6N5 450 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 CCDC18Q5T9S5 1454 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 NBEAQ8NFP9 2946 aa3.98□□□□□ -1.77
AC055720.1-201ENST00000539552 CDC42BPGQ6DT37 1551 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 ALS2Q96Q42 1657 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 BCL9O00512 1426 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 KDM6AO15550 1401 aaPredicted RBP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 ARHGAP31Q2M1Z3 1444 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 SSH2Q76I76 1423 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 PCSK5Q92824 1860 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 TRAV34A0A0B4J273 112 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 A0A0G2JNJ9 132 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 A0A1W2PR48 441 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 LRRD1A4D1F6 860 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 FAM90A18PA6NE21 464 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 FAM90A16PA6NEW6 464 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 FAM90A9PA6NNJ1 464 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 EFCAB8A8MWE9 144 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 FAM90A5PA8MXJ8 464 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 H0Y858 1186 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 IKBKBO14920 756 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 TNFSF14O43557 240 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 GCNT3O95395 438 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 FTCDO95954 541 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 LRG1P02750 347 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 TPOP07202 933 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 FAM90A15PP0C7V4 464 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 FAM90A14PP0C7W9 464 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 GAAP10253 952 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CKBP12277 381 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 XRCC6P12956 609 aaKnown RBP eCLIP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 GYPEP15421 78 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 PECAM1P16284 738 aaPredicted RBP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 TYMPP19971 482 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 SP100P23497 879 aaPredicted RBP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CCNCP24863 283 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 TMOD1P28289 359 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 SERPINA4P29622 427 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 ADSSP30520 456 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 PPARGP37231 505 aaPredicted RBP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 MATR3P43243 847 aaKnown RBP eCLIP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 ASMTP46597 345 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 SLC6A9P48067 706 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 AMPHP49418 695 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 MEOX1P50221 254 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CDK7P50613 346 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 RBM5P52756 815 aaKnown RBP eCLIP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 WNT3AP56704 352 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CTXN1P60606 82 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 GMFBP60983 142 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 NOMO3P69849 1222 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 MRPS21P82921 87 aaKnown RBP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 DGCR2P98153 550 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CD83Q01151 205 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 DUSP2Q05923 314 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 EXOSC9Q06265 439 aaKnown RBP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CD69Q07108 199 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 SCN1BQ07699 218 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CTBP1Q13363 440 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CAMK2DQ13557 499 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 ITGA7Q13683 1181 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 IRF3Q14653 427 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CRYMQ14894 314 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 NFIL3Q16649 462 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CR1LQ2VPA4 569 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 BTBD16Q32M84 506 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 MAJINQ3KP22 176 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 CAVIN4Q5BKX8 364 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 LIPMQ5VYY2 423 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 KRT40Q6A162 431 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 MRNIPQ6NTE8 343 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 NCEH1Q6PIU2 408 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 MEX3BQ6ZN04 569 aaKnown RBP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 C15orf52Q6ZUT6 534 aaKnown RBP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 SYT13Q7L8C5 426 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 TAS1R1Q7RTX1 841 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 UBE3BQ7Z3V4 1068 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 TAX1BP1Q86VP1 789 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 TMEM200AQ86VY9 491 aa3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 DZIP1Q86YF9 867 aaKnown RBP3.97□□□□□ -1.77
AC055720.1-201ENST00000539552 WDR63Q8IWG1 891 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms