RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 OPTCQ9UBM4 332 aa7□□□□□ -1.29
SORT1-209ENST00000538502 LGALS13Q9UHV8 139 aa7□□□□□ -1.29
SORT1-209ENST00000538502 A0A0B4J269 797 aa7□□□□□ -1.29
SORT1-209ENST00000538502 A0A0X1KG70 313 aa7□□□□□ -1.29
SORT1-209ENST00000538502 ASS1P00966 412 aaKnown RBP7□□□□□ -1.29
SORT1-209ENST00000538502 SERPINF2P08697 491 aa7□□□□□ -1.29
SORT1-209ENST00000538502 ATN1P54259 1190 aaPredicted RBP7□□□□□ -1.29
SORT1-209ENST00000538502 CACNB2Q08289 660 aaPredicted RBP7□□□□□ -1.29
SORT1-209ENST00000538502 BAATQ14032 418 aaPredicted RBP7□□□□□ -1.29
SORT1-209ENST00000538502 BHLHB9Q6PI77 547 aa7□□□□□ -1.29
SORT1-209ENST00000538502 C11orf74Q86VG3 221 aa7□□□□□ -1.29
SORT1-209ENST00000538502 STX12Q86Y82 276 aa7□□□□□ -1.29
SORT1-209ENST00000538502 IQCKQ8N0W5 287 aa7□□□□□ -1.29
SORT1-209ENST00000538502 SNIP1Q8TAD8 396 aaKnown RBP7□□□□□ -1.29
SORT1-209ENST00000538502 MCOLN3Q8TDD5 553 aa7□□□□□ -1.29
SORT1-209ENST00000538502 CD101Q93033 1021 aa7□□□□□ -1.29
SORT1-209ENST00000538502 SRP68Q9UHB9 627 aaKnown RBP7□□□□□ -1.29
SORT1-209ENST00000538502 GPR75-ASB3A0A0A6YYF3 556 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CYP27B1O15528 508 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 RGS10O43665 173 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 LDOC1O95751 146 aaPredicted RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 HMGCRP04035 888 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ZNF24P17028 368 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 HOXD10P28358 340 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 GRIA4P48058 902 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ARHGDIBP52566 201 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 PLIN5Q00G26 463 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 BST1Q10588 318 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 SLC9A5Q14940 896 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 PTGES3Q15185 160 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 NTRK3Q16288 839 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ALFQ53S48 1182 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 MARC1Q5VT66 337 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 DNAJB7Q7Z6W7 309 aaPredicted RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 SYT12Q8IV01 421 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 TMIEQ8NEW7 156 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 TDRD1Q9BXT4 1180 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 NLNQ9BYT8 704 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CDHR5Q9HBB8 845 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 PTGFRNQ9P2B2 879 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 FETUBQ9UGM5 382 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 POLIQ9UNA4 740 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 GTF2A1LQ9UNN4 478 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 SIGLEC16A6NMB1 481 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 SUPT20HL2P0C7V6 817 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 DSG3P32926 999 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 HNF4AP41235 474 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 AKR1D1P51857 326 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 IL18R1Q13478 541 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CCNYL2Q5T2Q4 361 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 TDRPQ86YL5 185 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 LMTK2Q8IWU2 1503 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 PCDH20Q8N6Y1 951 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 ZFP28Q8NHY6 868 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 LRRC20Q8TCA0 184 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 FAR1Q8WVX9 515 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 GMCL1Q96IK5 515 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ZNF512Q96ME7 567 aaPredicted RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 ERMAPQ96PL5 475 aaPredicted RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 EHD4Q9H223 541 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CDH22Q9UJ99 828 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 ARHGEF33A8MVX0 844 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 MDM4O15151 490 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 REM1O75628 298 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 JCHAINP01591 159 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CHRNGP07510 517 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 NR2F6P10588 404 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CDC25CP30307 473 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CNPY1Q3B7I2 92 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 HYIQ5T013 277 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 IL27RAQ6UWB1 636 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 RNF19BQ6ZMZ0 732 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 USP43Q70EL4 1123 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ZNF34Q8IZ26 560 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CERS2Q96G23 380 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 VPS35Q96QK1 796 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 PHF12Q96QT6 1004 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 PIF1Q9H611 641 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CATSPERZQ9NTU4 200 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 TRPC4Q9UBN4 977 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 SCAF8Q9UPN6 1271 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 SALL3Q9BXA9 1300 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 TEX46H3BTG2 121 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 FSCN2O14926 492 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 MICAL2O94851 1124 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 STAU1O95793 577 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 COX7A2P14406 83 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 HPGDP15428 266 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 S100GP29377 79 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CCR1P32246 355 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 ELP6Q0PNE2 266 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 UBAP2LQ14157 1087 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 SEC23AQ15436 765 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 MTSS1LQ765P7 747 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 PAGE2Q7Z2X7 111 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 R3HCC1LQ7Z5L2 792 aaKnown RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 PTAR1Q7Z6K3 402 aaPredicted RBP6.99□□□□□ -1.29
SORT1-209ENST00000538502 TAF8Q7Z7C8 310 aa6.99□□□□□ -1.29
SORT1-209ENST00000538502 CLNKQ7Z7G1 428 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms