RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CRTAMO95727 393 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 MT-ND1P03886 318 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 STIP1P31948 543 aaKnown RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 HKDC1Q2TB90 917 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SNAP47Q5SQN1 464 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 C1orf189Q5VU69 101 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF621Q6ZSS3 439 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 AHSA2Q719I0 299 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 NIM1KQ8IY84 436 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 MEIOBQ8N635 442 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 OR2T34Q8NGX1 318 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 OR2T3Q8NH03 318 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 VPS35Q96QK1 796 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 PCDH18Q9HCL0 1135 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CCDC177Q9NQR7 707 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 DCDC2CA8MYV0 355 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 NDUFS2O75306 463 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CHRM3P20309 590 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CRABP2P29373 138 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 RXRGP48443 463 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 RAB42Q8N4Z0 105 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 FITM2Q8N6M3 262 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 KBTBD7Q8WVZ9 684 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CHCHD6Q9BRQ6 235 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 A0A096LPK6 155 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 PROSCO94903 275 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 OXSR1O95747 527 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 STAU1O95793 577 aaKnown RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ERVK-10P10266 1014 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 MGAT1P26572 445 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CD83Q01151 205 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 PRKCQQ04759 706 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 MACC1Q6ZN28 852 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 LRRC40Q9H9A6 602 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SLC25A13Q9UJS0 675 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CCNL1Q9UK58 526 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ITGA11Q9UKX5 1188 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SORCS3Q9UPU3 1222 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 USP42Q9H9J4 1324 aaKnown RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ISPDA4D126 451 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 GZMAP12544 262 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 MARCKSL1P49006 195 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 YWHAZP63104 245 aaKnown RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 NKX1-1Q15270 411 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 HS6ST3Q8IZP7 471 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 FNDC5Q8NAU1 212 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SMYD1Q8NB12 490 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 KCNS3Q9BQ31 491 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 FICDQ9BVA6 458 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ADPRHL2Q9NX46 363 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SH3BP4Q9P0V3 963 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 STOX2Q9P2F5 926 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 PCYOX1Q9UHG3 505 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 AP2A2O94973 939 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF24P17028 368 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 MTHFRP42898 656 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 AMPD2Q01433 879 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF677Q86XU0 584 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 DEPDC4Q8N2C3 294 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 NEDD1Q8NHV4 660 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SLC7A14Q8TBB6 771 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 FAM167AQ96KS9 214 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 BTBD9Q96Q07 612 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TM7SF2O76062 418 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ITGB1P05556 798 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 DSG3P32926 999 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TOB1P50616 345 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 BTBD16Q32M84 506 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 DCAF6Q58WW2 860 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TWF2Q6IBS0 349 aaKnown RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TMPRSS11AQ6ZMR5 421 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 FAM126BQ8IXS8 530 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 THEM5Q8N1Q8 247 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TRIM62Q9BVG3 475 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 USP18Q9UMW8 372 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 HSPB11Q9Y547 144 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 FMN2Q9NZ56 1722 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CDC42BPGQ6DT37 1551 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 EFCAB9A8MZ26 197 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 FBP2O00757 339 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CDC42P60953 191 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 AADACL2Q6P093 401 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 PALB2Q86YC2 1186 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 C12orf43Q96C57 262 aaKnown RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TPP1O14773 563 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 SERPINF2P08697 491 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PPP2R1BP30154 601 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 C1QBPQ07021 282 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CUL2Q13617 745 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 PFKFB4Q16877 469 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 CLHC1Q8NHS4 586 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 REXO5Q96IC2 774 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 TMEM114B3SHH9 223 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 C9IYK1 514 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 H0YJX3 145 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 ECDO95905 644 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 FDPSP14324 419 aaKnown RBP5.72□□□□□ -1.49
CSMD1-215ENST00000537824 GJA9P57773 515 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 BTBD8Q5XKL5 378 aa5.72□□□□□ -1.49
CSMD1-215ENST00000537824 GCNT7Q6ZNI0 430 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms