RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 NUMBP49757 651 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 TRAP1Q12931 704 aaKnown RBP10.77□□□□□ -0.69
CLIP1-209ENST00000537178 MTAPQ13126 283 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 LPIN1Q14693 890 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 ALG11Q2TAA5 492 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 SLC45A4Q5BKX6 768 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 SPDYCQ5MJ68 293 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 NT5DC1Q5TFE4 455 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 BROXQ5VW32 411 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 KCNT2Q6UVM3 1135 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 RPTNQ6XPR3 784 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 FBXW8Q8N3Y1 598 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 SEMA4DQ92854 862 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 MYDGFQ969H8 173 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 AHCYL2Q96HN2 611 aaKnown RBP10.77□□□□□ -0.69
CLIP1-209ENST00000537178 OSMRQ99650 979 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 POLR1EQ9GZS1 481 aaKnown RBP10.77□□□□□ -0.69
CLIP1-209ENST00000537178 TRIM39Q9HCM9 518 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 SAE1Q9UBE0 346 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-209ENST00000537178 PHF11Q9UIL8 331 aa10.77□□□□□ -0.69
CLIP1-209ENST00000537178 TUFMP49411 452 aaKnown RBP10.76□□□□□ -0.69
CLIP1-209ENST00000537178 TCEA2Q15560 299 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 SETMARQ53H47 684 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-209ENST00000537178 OFCC1Q8IZS5 231 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 GMCL1Q96IK5 515 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 STARD7Q9NQZ5 370 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 SNX6Q9UNH7 406 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 ERGIC3Q9Y282 383 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 RGS20O76081 388 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 PLK1P53350 603 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 FBXO30Q8TB52 745 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 ACER1Q8TDN7 264 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 PTCD3Q96EY7 689 aaKnown RBP10.76□□□□□ -0.69
CLIP1-209ENST00000537178 VPS35Q96QK1 796 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 PDCD2LQ9BRP1 358 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 RSPH9Q9H1X1 276 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-209ENST00000537178 PTGFRNQ9P2B2 879 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 KLQ9UEF7 1012 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 PSMG1O95456 288 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 SEC24AO95486 1093 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 CBX6O95503 412 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 NPR3P17342 541 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 S100GP29377 79 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 TNK2Q07912 1038 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 ZNF844Q08AG5 666 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 QPRTQ15274 297 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 USP45Q70EL2 814 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 FBXO16Q8IX29 292 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-209ENST00000537178 LGI2Q8N0V4 545 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 PDCD10Q9BUL8 212 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 ACTL7BQ9Y614 415 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 SNCAIPQ9Y6H5 919 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 RREB1Q92766 1687 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 RARAP10276 462 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 FMO4P31512 558 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 CRATP43155 626 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 MMP13P45452 471 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 THOP1P52888 689 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 MAPK10P53779 464 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 PKNOX1P55347 436 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 ZNF846Q147U1 533 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 PARP6Q2NL67 630 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 ZPBP2Q6X784 338 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 DEFB106AQ8N104 65 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 ETNPPLQ8TBG4 499 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 MAGEE2Q8TD90 523 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-209ENST00000537178 TATDN2Q93075 761 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 MTMR8Q96EF0 704 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 SMPD4Q9NXE4 827 aa10.76□□□□□ -0.69
CLIP1-209ENST00000537178 ASTN2O75129 1339 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 CCDC182A6NF36 153 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 NTSR2O95665 410 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 NFKB1P19838 968 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 ADRA1DP25100 572 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 TPP2P29144 1249 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 SLC27A1Q6PCB7 646 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 R3HCC1LQ7Z5L2 792 aaKnown RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 TRAPPC5Q8IUR0 188 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 LRRC17Q8N6Y2 441 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 PIWIL2Q8TC59 973 aaKnown RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 GRIP2Q9C0E4 1043 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 IL22Q9GZX6 179 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 ING3Q9NXR8 418 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 LEF1Q9UJU2 399 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 ANGPT4Q9Y264 503 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 IRAK3Q9Y616 596 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 SSNA1O43805 119 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 AHCYL1O43865 530 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 XYLBO75191 536 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 NTRK1P04629 796 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 BMP7P18075 431 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 CYP2C18P33260 490 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 PBX1P40424 430 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 SLC6A3Q01959 620 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 AKIRIN2Q53H80 203 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 TSHZ1Q6ZSZ6 1077 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 RNF44Q7L0R7 432 aa10.75□□□□□ -0.69
CLIP1-209ENST00000537178 ZCCHC9Q8N567 271 aaKnown RBP10.75□□□□□ -0.69
CLIP1-209ENST00000537178 DNERQ8NFT8 737 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms