RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 DENND5AQ6IQ26 1287 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 FBXL22Q6P050 247 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 ANKRD33Q7Z3H0 272 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 ZC3HC1Q86WB0 502 aaKnown RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 ARID3BQ8IVW6 561 aaPredicted RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 SPATA22Q8NHS9 363 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 SH3TC2Q8TF17 1288 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 STON2Q8WXE9 905 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 MRGPRX2Q96LB1 330 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 TOX2Q96NM4 488 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 RPRD1AQ96P16 312 aaPredicted RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 APOL2Q9BQE5 337 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 MECRQ9BV79 373 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 NOL6Q9H6R4 1146 aaKnown RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 TLE6Q9H808 572 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 ATP13A1Q9HD20 1204 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 UBP1Q9NZI7 540 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 MAGED2Q9UNF1 606 aaPredicted RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 CDY1Q9Y6F8 540 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 SLC38A8A6NNN8 435 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 F5H5T6 163 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 TLR5O60602 858 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 PEX11BO96011 259 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 EPOP01588 193 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 RALBP11234 206 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 FGF3P11487 239 aaPredicted RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 HOXB8P17481 243 aaPredicted RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 TPH1P17752 444 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 CCND1P24385 295 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 TARSP26639 723 aaKnown RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 SERPINB3P29508 390 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 SLC1A6P48664 564 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 SLC11A2P49281 568 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 HARS2P49590 506 aaKnown RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 SERPINH1P50454 418 aaKnown RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 WNT3AP56704 352 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 KCNJ2P63252 427 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 PCLAFQ15004 111 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 CTC1Q2NKJ3 1217 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 RTP2Q5QGT7 225 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 TPGS2Q68CL5 300 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 KDELC1Q6UW63 502 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 ZNF296Q8WUU4 475 aaPredicted RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 PLD4Q96BZ4 506 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 HMCESQ96FZ2 354 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 AGAP2Q99490 1192 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 DDX50Q9BQ39 737 aaKnown RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 MAGEH1Q9H213 219 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 NMRAL1Q9HBL8 299 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 PAK6Q9NQU5 681 aaPredicted RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 TREX1Q9NSU2 369 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 HAO1Q9UJM8 370 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 NUDT5Q9UKK9 219 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 OGDHLQ9ULD0 1010 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 MAFFQ9ULX9 164 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 APOBEC2Q9Y235 224 aaKnown RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 A0A087X1B8 175 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 MT-CYBP00156 380 aaPredicted RBP13.75□□□□□ -0.21
SMG6-203ENST00000536871 GSRP00390 522 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 C2P06681 752 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 SERPINA6P08185 405 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 T-ENOLP0DO92 83 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 CES1P23141 567 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 CSRP3P50461 194 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 OLIG2Q13516 323 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 SERINC3Q13530 473 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 RABGAP1LQ5R372 815 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 TADA1Q96BN2 335 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 POLR1EQ9GZS1 481 aaKnown RBP13.75□□□□□ -0.21
SMG6-203ENST00000536871 MMADHCQ9H3L0 296 aaPredicted RBP13.75□□□□□ -0.21
SMG6-203ENST00000536871 NOD2Q9HC29 1040 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 NDFIP2Q9NV92 336 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 TMEM216Q9P0N5 145 aa13.75□□□□□ -0.21
SMG6-203ENST00000536871 AFF4Q9UHB7 1163 aaKnown RBP13.75□□□□□ -0.21
SMG6-203ENST00000536871 FCHO1O14526 889 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 PMPCBO75439 489 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 KLHL2O95198 593 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 EFEMP2O95967 443 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 KRT16P08779 473 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 ESRRAP11474 423 aaPredicted RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 ALOX15P16050 662 aaPredicted RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 HLA-DPA1P20036 260 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 TACR2P21452 398 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 RFC2P35250 354 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 ETFBP38117 255 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 ARCN1P48444 511 aaKnown RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 CD151P48509 253 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 ABCE1P61221 599 aaKnown RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 POU4F1Q01851 419 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 DUSP4Q13115 394 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 USP10Q14694 798 aaKnown RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 RFTN1Q14699 578 aaPredicted RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 WASHC2DQ5SRD0 308 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 RASIP1Q5U651 963 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 RAP1GAP2Q684P5 730 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 RAPH1Q70E73 1250 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 MIB1Q86YT6 1006 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms