RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 FCRL5Q96RD9 977 aa13.35□□□□□ -0.27
LDLR-203ENST00000535915 CATSPERBQ9H7T0 1116 aa13.35□□□□□ -0.27
LDLR-203ENST00000535915 GLOD4Q9HC38 313 aa13.35□□□□□ -0.27
LDLR-203ENST00000535915 S100A14Q9HCY8 104 aa13.35□□□□□ -0.27
LDLR-203ENST00000535915 ARHGAP26Q9UNA1 814 aa13.35□□□□□ -0.27
LDLR-203ENST00000535915 MSI1O43347 362 aaKnown RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 MAFKO60675 156 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 DUSP11O75319 330 aaKnown RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 IGLV3-25P01717 112 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 LINGO3P0C6S8 592 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 SLC35E2BP0CK96 405 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 GABRB3P28472 473 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 CD52P31358 61 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 SERPINB5P36952 375 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 CCR10P46092 362 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 MPP1Q00013 466 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 UGP2Q16851 508 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 METTL21CQ5VZV1 264 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 ESRP1Q6NXG1 681 aaKnown RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 AAGABQ6PD74 315 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 SLC30A9Q6PML9 568 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 KDELC2Q7Z4H8 507 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 MRPL10Q7Z7H8 261 aaKnown RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 ITFG2Q969R8 447 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 HAPLN3Q96S86 360 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 FSD1LQ9BXM9 530 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 SLC39A8Q9C0K1 460 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 DRC3Q9H069 523 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 VCXQ9H320 206 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 WDR55Q9H6Y2 383 aaPredicted RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 ABCC13Q9NSE7 274 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 DLGAP2Q9P1A6 1054 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 RAP2CQ9Y3L5 183 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 MATN3O15232 486 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 KPNA6O60684 536 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 PMPCBO75439 489 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 PIGNO95427 931 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 PGK1P00558 417 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 CYP11A1P05108 521 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 PRDX6P30041 224 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 CCR1P32246 355 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 CSRP3P50461 194 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 TUBP50607 506 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 RPL14P50914 215 aaKnown RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 NAGLUP54802 743 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 DSG1Q02413 1049 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 TBL3Q12788 808 aaKnown RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 ZNF460Q14592 562 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 BRMS1LQ5PSV4 323 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 TCHHL1Q5QJ38 904 aaPredicted RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 SEL1L3Q68CR1 1132 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 OVOS1Q6IE37 1185 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 PGM2L1Q6PCE3 622 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 KLHDC8BQ8IXV7 354 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 SCML4Q8N228 414 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 FSTL5Q8N475 847 aaPredicted RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 TMEM151AQ8N4L1 468 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 EFCAB3Q8N7B9 438 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 FCRL2Q96LA5 508 aaPredicted RBP13.34□□□□□ -0.27
LDLR-203ENST00000535915 IL12RB2Q99665 862 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 FTHL17Q9BXU8 183 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 NDFIP2Q9NV92 336 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 NUDT5Q9UKK9 219 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 PADI3Q9ULW8 664 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 ACOT9Q9Y305 439 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 BRCA2P51587 3418 aa13.34□□□□□ -0.27
LDLR-203ENST00000535915 MATN2O00339 956 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 TNPO2O14787 897 aaKnown RBP13.33□□□□□ -0.27
LDLR-203ENST00000535915 HDAC3O15379 428 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 FGF10O15520 208 aaPredicted RBP13.33□□□□□ -0.27
LDLR-203ENST00000535915 MGEA5O60502 916 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 CABYRO75952 493 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 DDHD2O94830 711 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 MOCS2O96007 188 aaPredicted RBP13.33□□□□□ -0.27
LDLR-203ENST00000535915 SBK3P0C264 359 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 GRIK1P39086 918 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 GEMP55040 296 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 TSPY1Q01534 308 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 LBRQ14739 615 aaKnown RBP13.33□□□□□ -0.27
LDLR-203ENST00000535915 ARL13AQ5H913 290 aaPredicted RBP13.33□□□□□ -0.27
LDLR-203ENST00000535915 SERINC5Q86VE9 423 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 HPS6Q86YV9 775 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 THEM5Q8N1Q8 247 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 HIPK4Q8NE63 616 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 CASP10Q92851 521 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 PKMYT1Q99640 499 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 ATXN3LQ9H3M9 355 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 SCOCQ9UIL1 159 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 DSEQ9UL01 958 aa13.33□□□□□ -0.27
LDLR-203ENST00000535915 FAM95CA0A1B0GW59 222 aa13.33□□□□□ -0.28
LDLR-203ENST00000535915 GLDCP23378 1020 aa13.33□□□□□ -0.28
LDLR-203ENST00000535915 EPHA3P29320 983 aa13.33□□□□□ -0.28
LDLR-203ENST00000535915 THPOP40225 353 aa13.33□□□□□ -0.28
LDLR-203ENST00000535915 RAB27AP51159 221 aa13.33□□□□□ -0.28
LDLR-203ENST00000535915 SLC5A3P53794 718 aa13.33□□□□□ -0.28
LDLR-203ENST00000535915 RAB10P61026 200 aa13.33□□□□□ -0.28
LDLR-203ENST00000535915 BTKQ06187 659 aa13.33□□□□□ -0.28
LDLR-203ENST00000535915 ASPHQ12797 758 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms