RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ACACBO00763 2458 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 A0A1W2PR77 199 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 LRRC72A6NJI9 287 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 UPK3BL1B0FP48 263 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 RASA4BC9J798 803 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 UPK3BL2E5RIL1 263 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 KPNA3O00505 521 aaPredicted RBP16.69■□□□□ 0.26
ATL3-202ENST00000535789 SLC7A4O43246 635 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 SPINT1O43278 529 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 RASA4O43374 803 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 KDELR3O43731 214 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 MYBL1P10243 752 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 PMLP29590 882 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 AFF3P51826 1226 aaKnown RBP16.69■□□□□ 0.26
ATL3-202ENST00000535789 POLD3Q15054 466 aaPredicted RBP16.69■□□□□ 0.26
ATL3-202ENST00000535789 ASTE1Q2TB18 679 aaPredicted RBP16.69■□□□□ 0.26
ATL3-202ENST00000535789 HLA-BQ31612 363 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 ARSIQ5FYB1 569 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 TP53INP2Q8IXH6 220 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 UMODL1-AS1Q8N2C9 162 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 NPWQ8N729 165 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 TMIEQ8NEW7 156 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 DNAJC7Q99615 494 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.69■□□□□ 0.26
ATL3-202ENST00000535789 PACSIN1Q9BY11 444 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 DHX35Q9H5Z1 703 aaKnown RBP16.69■□□□□ 0.26
ATL3-202ENST00000535789 GAREM1Q9H706 876 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 PDFQ9HBH1 243 aa16.69■□□□□ 0.26
ATL3-202ENST00000535789 CXorf51AA0A1B0GTR3 108 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 KCNK3O14649 394 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 MFAP3LO75121 409 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 TMCC1O94876 653 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 CYP1A2P05177 515 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 MAT2AP31153 395 aaKnown RBP16.68■□□□□ 0.26
ATL3-202ENST00000535789 CTSKP43235 329 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 ATXN3P54252 364 aaPredicted RBP16.68■□□□□ 0.26
ATL3-202ENST00000535789 TPI1P60174 286 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 SLC25A11Q02978 314 aaKnown RBP16.68■□□□□ 0.26
ATL3-202ENST00000535789 SLC20A2Q08357 652 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 SERINC3Q13530 473 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 CARD16Q5EG05 197 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 ATXN7L2Q5T6C5 722 aaPredicted RBP16.68■□□□□ 0.26
ATL3-202ENST00000535789 ERMARDQ5T6L9 678 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 FAM46CQ5VWP2 391 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 PARS2Q7L3T8 475 aaKnown RBP16.68■□□□□ 0.26
ATL3-202ENST00000535789 TRIM69Q86WT6 500 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 ARHGAP12Q8IWW6 846 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 TRIM11Q96F44 468 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 CELF6Q96J87 481 aaKnown RBP16.68■□□□□ 0.26
ATL3-202ENST00000535789 ZDHHC5Q9C0B5 715 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 WASF3Q9UPY6 502 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 CA5BQ9Y2D0 317 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 ANKRD6Q9Y2G4 727 aa16.68■□□□□ 0.26
ATL3-202ENST00000535789 BZW2Q9Y6E2 419 aaKnown RBP16.68■□□□□ 0.26
ATL3-202ENST00000535789 EEF2KO00418 725 aaKnown RBP16.67■□□□□ 0.26
ATL3-202ENST00000535789 FGF10O15520 208 aaPredicted RBP16.67■□□□□ 0.26
ATL3-202ENST00000535789 SH3BP5O60239 455 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 TOP3BO95985 862 aaKnown RBP16.67■□□□□ 0.26
ATL3-202ENST00000535789 PRNPP04156 253 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 ETFBP38117 255 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 EIF4A3P38919 411 aaKnown RBP16.67■□□□□ 0.26
ATL3-202ENST00000535789 RACK1P63244 317 aaKnown RBP16.67■□□□□ 0.26
ATL3-202ENST00000535789 SFSWAPQ12872 951 aaKnown RBP16.67■□□□□ 0.26
ATL3-202ENST00000535789 DPYSQ14117 519 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 SMTNL2Q2TAL5 461 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 AFMIDQ63HM1 303 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 ALKBH5Q6P6C2 394 aaKnown RBP16.67■□□□□ 0.26
ATL3-202ENST00000535789 ARHGAP36Q6ZRI8 547 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 TC2NQ8N9U0 490 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 ISG20Q96AZ6 181 aaKnown RBP16.67■□□□□ 0.26
ATL3-202ENST00000535789 CCDC114Q96M63 670 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 NUP85Q9BW27 656 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 KDM4CQ9H3R0 1056 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 ZDHHC6Q9H6R6 413 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 CAAP1Q9H8G2 361 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 CWC15Q9P013 229 aaKnown RBP16.67■□□□□ 0.26
ATL3-202ENST00000535789 LHX3Q9UBR4 397 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 GGT7Q9UJ14 662 aa16.67■□□□□ 0.26
ATL3-202ENST00000535789 ZFR2Q9UPR6 939 aaKnown RBP16.67■□□□□ 0.26
ATL3-202ENST00000535789 USP24Q9UPU5 2620 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 KMT2BQ9UMN6 2715 aaPredicted RBP16.66■□□□□ 0.26
ATL3-202ENST00000535789 TBC1D3DA0A087WVF3 549 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 TBC1D3IA0A087WXS9 549 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 TBC1D3EA0A087X179 549 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 TBC1D3KA0A087X1G2 549 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 SPAARA0A1B0GVQ0 90 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 TBC1D3FA6NER0 549 aaPredicted RBP16.66■□□□□ 0.26
ATL3-202ENST00000535789 GOLGA6L6A8MZA4 724 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 TBC1D3LB9A6J9 549 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 AKR1B15C9JRZ8 316 aaPredicted RBP16.66■□□□□ 0.26
ATL3-202ENST00000535789 H0Y8X5 98 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 J3KR12 359 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 CBFA2T3O75081 653 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 GSRP00390 522 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 TBC1D3HP0C7X1 549 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 CEACAM1P13688 526 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 ITGB7P26010 798 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 ABL2P42684 1182 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 DNA2P51530 1060 aa16.66■□□□□ 0.26
ATL3-202ENST00000535789 ADKP55263 362 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms