RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CNTN1Q12860 1018 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 SLC45A4Q5BKX6 768 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 NAPEPLDQ6IQ20 393 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 C22orf39Q6P5X5 142 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 NYAP1Q6ZVC0 841 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 IRF2BP2Q7Z5L9 587 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 TFAP2DQ7Z6R9 452 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 ADAT2Q7Z6V5 191 aaKnown RBP11.03□□□□□ -0.64
CCDC60-202ENST00000535685 PRPF39Q86UA1 669 aaKnown RBP11.03□□□□□ -0.64
CCDC60-202ENST00000535685 OXR1Q8N573 874 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 PCDH20Q8N6Y1 951 aaKnown RBP11.03□□□□□ -0.64
CCDC60-202ENST00000535685 EMC1Q8N766 993 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 MFSD2AQ8NA29 543 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 ATP11CQ8NB49 1132 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 JOSD2Q8TAC2 188 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 ISG20Q96AZ6 181 aaKnown RBP11.03□□□□□ -0.64
CCDC60-202ENST00000535685 VCPIP1Q96JH7 1222 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 SLC6A18Q96N87 628 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 ELF4Q99607 663 aaPredicted RBP11.03□□□□□ -0.64
CCDC60-202ENST00000535685 AGPAT1Q99943 283 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 HDAC8Q9BY41 377 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 TMEM248Q9NWD8 314 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 TMEM63CQ9P1W3 806 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 NEU3Q9UQ49 428 aa11.03□□□□□ -0.64
CCDC60-202ENST00000535685 TBC1D3DA0A087WVF3 549 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TBC1D3IA0A087WXS9 549 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TBC1D3EA0A087X179 549 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TBC1D3KA0A087X1G2 549 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TBC1D3FA6NER0 549 aaPredicted RBP11.02□□□□□ -0.65
CCDC60-202ENST00000535685 SMTNL1A8MU46 457 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TBC1D3LB9A6J9 549 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 HYAL3O43820 417 aaPredicted RBP11.02□□□□□ -0.65
CCDC60-202ENST00000535685 MAGEC1O60732 1142 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 SRGAP2O75044 1071 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 RTN2O75298 545 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 CD160O95971 181 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TBC1D3HP0C7X1 549 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 GPD1P21695 349 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 RRM1P23921 792 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 L1CAMP32004 1257 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 SERPINH1P50454 418 aaKnown RBP11.02□□□□□ -0.65
CCDC60-202ENST00000535685 MMP16P51512 607 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 ZNF143P52747 638 aaPredicted RBP11.02□□□□□ -0.65
CCDC60-202ENST00000535685 METAP1P53582 386 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 AIF1P55008 147 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 GEMIN4P57678 1058 aaKnown RBP11.02□□□□□ -0.65
CCDC60-202ENST00000535685 NXPH1P58417 271 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TAS2R38P59533 333 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 PPP2CBP62714 309 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 PPP2CAP67775 309 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 C15orf59Q2T9L4 293 aaPredicted RBP11.02□□□□□ -0.65
CCDC60-202ENST00000535685 INAVAQ3KP66 663 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 PIP5KL1Q5T9C9 394 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TBC1D3GQ6DHY5 549 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TBC1D3CQ6IPX1 549 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 WDR59Q6PJI9 974 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 SLCO6A1Q86UG4 719 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 ZSCAN30Q86W11 494 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TBC1D3Q8IZP1 549 aaPredicted RBP11.02□□□□□ -0.65
CCDC60-202ENST00000535685 OR7D4Q8NG98 312 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 RHBDD1Q8TEB9 315 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 SETD7Q8WTS6 366 aaKnown RBP11.02□□□□□ -0.65
CCDC60-202ENST00000535685 BAP1Q92560 729 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 SERAC1Q96JX3 654 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 UCN2Q96RP3 112 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 SELENOOQ9BVL4 669 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 MAGEH1Q9H213 219 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 PRDM9Q9NQV7 894 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 TOR4AQ9NXH8 423 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 CFAP47Q6ZTR5 3102 aa11.02□□□□□ -0.65
CCDC60-202ENST00000535685 MYLKQ15746 1914 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 ASXL3Q9C0F0 2248 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 SPEGQ15772 3267 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.01□□□□□ -0.65
CCDC60-202ENST00000535685 A0A1W2PQC6 194 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 ZSCAN5CA6NGD5 496 aaPredicted RBP11.01□□□□□ -0.65
CCDC60-202ENST00000535685 WASH4PA8MWX3 477 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 C1QTNF9BB2RNN3 333 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 PRAMEF26H0Y7S4 382 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 K7ERQ8 282 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 TLR4O00206 839 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 WNT9AO14904 365 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 TNFSF14O43557 240 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 LRIG2O94898 1065 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 CAPNS1P04632 268 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 PLEKP08567 350 aaPredicted RBP11.01□□□□□ -0.65
CCDC60-202ENST00000535685 C1QTNF9P0C862 333 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 ATP1A3P13637 1013 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 SPINK2P20155 84 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 HTR7P34969 479 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 RECQLP46063 649 aaPredicted RBP11.01□□□□□ -0.65
CCDC60-202ENST00000535685 ARF5P84085 180 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 SHBQ15464 509 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 SETMARQ53H47 684 aaPredicted RBP11.01□□□□□ -0.65
CCDC60-202ENST00000535685 RAB6CQ53S08 254 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 ACAD10Q6JQN1 1059 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 LAYNQ6UX15 382 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 DPY19L3Q6ZPD9 716 aa11.01□□□□□ -0.65
CCDC60-202ENST00000535685 ERN2Q76MJ5 926 aaKnown RBP11.01□□□□□ -0.65
CCDC60-202ENST00000535685 MCOLN2Q8IZK6 566 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms