RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 PTPRN2Q92932 1015 aa15.84■□□□□ 0.13
CNN1-202ENST00000535659 GABRG3Q99928 467 aa15.84■□□□□ 0.13
CNN1-202ENST00000535659 CINPQ9BW66 212 aaPredicted RBP15.84■□□□□ 0.13
CNN1-202ENST00000535659 AMACRQ9UHK6 382 aa15.84■□□□□ 0.13
CNN1-202ENST00000535659 MRFAP1Q9Y605 127 aa15.84■□□□□ 0.13
CNN1-202ENST00000535659 EDDM13A0A1B0GTR0 161 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 CCDC188H7C350 402 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 SGK1O00141 431 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 ADAM23O75077 832 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 PHF2O75151 1096 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 EPHX1P07099 455 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 PRKCHP24723 683 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 HOXD11P31277 338 aaPredicted RBP15.83■□□□□ 0.12
CNN1-202ENST00000535659 COILP38432 576 aaPredicted RBP15.83■□□□□ 0.12
CNN1-202ENST00000535659 HSPA9P38646 679 aaKnown RBP15.83■□□□□ 0.12
CNN1-202ENST00000535659 RHOAP61586 193 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 LMNB2Q03252 620 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 CKAP4Q07065 602 aaKnown RBP15.83■□□□□ 0.12
CNN1-202ENST00000535659 ZBTB17Q13105 803 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 ZNF235Q14590 738 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 CARD16Q5EG05 197 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 EOGTQ5NDL2 527 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 C22orf39Q6P5X5 142 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 Q6ZS52 159 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 CNTD1Q8N815 330 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 ZNF366Q8N895 744 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 SPATA4Q8NEY3 305 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 TEKT5Q96M29 485 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 TNKS2Q9H2K2 1166 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 MTG2Q9H4K7 406 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 HAUS2Q9NVX0 235 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 FEZ2Q9UHY8 353 aaPredicted RBP15.83■□□□□ 0.12
CNN1-202ENST00000535659 TRHDEQ9UKU6 1024 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 ATP8A1Q9Y2Q0 1164 aa15.83■□□□□ 0.12
CNN1-202ENST00000535659 C5orf60A6NFR6 353 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 RNF103O00237 685 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 PI15O43692 258 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 SYNCRIPO60506 623 aaKnown RBP15.82■□□□□ 0.12
CNN1-202ENST00000535659 STK10O94804 968 aaKnown RBP15.82■□□□□ 0.12
CNN1-202ENST00000535659 DCNP07585 359 aaKnown RBP15.82■□□□□ 0.12
CNN1-202ENST00000535659 CHRNA3P32297 505 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 CLCN5P51795 746 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 SNRPD1P62314 119 aaKnown RBP15.82■□□□□ 0.12
CNN1-202ENST00000535659 ITKQ08881 620 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 GAS6Q14393 721 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 FAM182AQ5T1J6 154 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 C9orf64Q5T6V5 341 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 TTC27Q6P3X3 843 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 PKN3Q6P5Z2 889 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 CCDC137Q6PK04 289 aaKnown RBP15.82■□□□□ 0.12
CNN1-202ENST00000535659 Q6ZVU0 165 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 PID1Q7Z2X4 250 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 PGBD5Q8N414 524 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 OR2AP1Q8NGE2 309 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 OR2A12Q8NGT7 310 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 AGAP3Q96P47 875 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 CEP41Q9BYV8 373 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 EPHX3Q9H6B9 360 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 NT5MQ9NPB1 228 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 LHX3Q9UBR4 397 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 MMP17Q9ULZ9 603 aa15.82■□□□□ 0.12
CNN1-202ENST00000535659 MUSKO15146 869 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 BNIP3LO60238 219 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 GCATO75600 419 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 GSRP00390 522 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 AOC1P19801 751 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 CES1P23141 567 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 RECQLP46063 649 aaPredicted RBP15.81■□□□□ 0.12
CNN1-202ENST00000535659 CSNK1DP48730 415 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 FNTAP49354 379 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 GDF10P55107 478 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 MYLK3Q32MK0 819 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 ANKRD20A2Q5SQ80 823 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 ANKRD20A1Q5TYW2 823 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 ANKRD20A3Q5VUR7 823 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 CWF19L1Q69YN2 538 aaKnown RBP15.81■□□□□ 0.12
CNN1-202ENST00000535659 SYT13Q7L8C5 426 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 GSTA5Q7RTV2 222 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 ZNF572Q7Z3I7 529 aaPredicted RBP15.81■□□□□ 0.12
CNN1-202ENST00000535659 ZNF567Q8N184 647 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 PBXIP1Q96AQ6 731 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 RTP4Q96DX8 246 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 ZNF419Q96HQ0 510 aaPredicted RBP15.81■□□□□ 0.12
CNN1-202ENST00000535659 CCDC114Q96M63 670 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 LRFN3Q9BTN0 628 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 TM6SF2Q9BZW4 377 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 DDX47Q9H0S4 455 aaKnown RBP15.81■□□□□ 0.12
CNN1-202ENST00000535659 CHRDQ9H2X0 955 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 PRSS16Q9NQE7 514 aa15.81■□□□□ 0.12
CNN1-202ENST00000535659 FARP1Q9Y4F1 1045 aaPredicted RBP15.81■□□□□ 0.12
CNN1-202ENST00000535659 MUC22E2RYF6 1773 aaPredicted RBP15.81■□□□□ 0.12
CNN1-202ENST00000535659 ZBTB24O43167 697 aaPredicted RBP15.8■□□□□ 0.12
CNN1-202ENST00000535659 SIN3BO75182 1162 aa15.8■□□□□ 0.12
CNN1-202ENST00000535659 POP4O95707 220 aaKnown RBP15.8■□□□□ 0.12
CNN1-202ENST00000535659 IGSF6O95976 241 aa15.8■□□□□ 0.12
CNN1-202ENST00000535659 HLA-DQB2P05538 268 aa15.8■□□□□ 0.12
CNN1-202ENST00000535659 HOXB2P14652 356 aa15.8■□□□□ 0.12
CNN1-202ENST00000535659 MAGEA9P43362 315 aa15.8■□□□□ 0.12
CNN1-202ENST00000535659 RGRP47804 291 aa15.8■□□□□ 0.12
CNN1-202ENST00000535659 SCNN1BP51168 640 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms