RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 HPCAP84074 193 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 PDE1BQ01064 536 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 LRRC32Q14392 662 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 PDK3Q15120 406 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 SIX1Q15475 284 aaPredicted RBP6.76□□□□□ -1.33
USP28-202ENST00000535607 P3H1Q32P28 736 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 ANKRD20A4Q4UJ75 823 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 EFHC1Q5JVL4 640 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 FSTL4Q6MZW2 842 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 DSTYKQ6XUX3 929 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 ESPNLQ6ZVH7 1005 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 B3GNT8Q7Z7M8 397 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 DHDDSQ86SQ9 333 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 PDSS2Q86YH6 399 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 CRLF3Q8IUI8 442 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 PALM2Q8IXS6 379 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 KATNAL2Q8IYT4 538 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 CNTD1Q8N815 330 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 GMCL1P1Q8NEA9 526 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 EXD1Q8NHP7 514 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 DTX3LQ8TDB6 740 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 DIS3LQ8TF46 1054 aaKnown RBP6.76□□□□□ -1.33
USP28-202ENST00000535607 PYROXD1Q8WU10 500 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 FAM172AQ8WUF8 416 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 NRG4Q8WWG1 115 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 PSPC1Q8WXF1 523 aaKnown RBP6.76□□□□□ -1.33
USP28-202ENST00000535607 LPAR1Q92633 364 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 GJA10Q969M2 543 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 BORCS6Q96GS4 357 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 VPS50Q96JG6 964 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 MBOAT7Q96N66 472 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 SMAD5Q99717 465 aaKnown RBP6.76□□□□□ -1.33
USP28-202ENST00000535607 TMEM120AQ9BXJ8 343 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 ANO3Q9BYT9 981 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 FRMD8Q9BZ67 464 aaPredicted RBP6.76□□□□□ -1.33
USP28-202ENST00000535607 CCDC68Q9H2F9 335 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 CNTD2Q9H8S5 307 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 AS3MTQ9HBK9 375 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 PREBQ9HCU5 417 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 ARL8BQ9NVJ2 186 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 RAB20Q9NX57 234 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 TUBA8Q9NY65 449 aaPredicted RBP6.76□□□□□ -1.33
USP28-202ENST00000535607 TAS2R1Q9NYW7 299 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 C6orf203Q9P0P8 240 aaPredicted RBP6.76□□□□□ -1.33
USP28-202ENST00000535607 MSRAQ9UJ68 235 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 RAB26Q9ULW5 256 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 FAF1Q9UNN5 650 aaPredicted RBP6.76□□□□□ -1.33
USP28-202ENST00000535607 EXOC7Q9UPT5 735 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 TBC1D30Q9Y2I9 924 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 IGSF9BQ9UPX0 1349 aa6.76□□□□□ -1.33
USP28-202ENST00000535607 LOC285556D6RIA3 1793 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 MYOCOSA0A1B0GUC4 107 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 CCDC162PA2VCL2 907 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 ANKRD63C9JTQ0 380 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 ADM5C9JUS6 153 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 H3BNX3 289 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 FCHO1O14526 889 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 DVL2O14641 736 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 CLIC2O15247 247 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 PAX4O43316 350 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 HNRNPRO43390 633 aaKnown RBP6.75□□□□□ -1.33
USP28-202ENST00000535607 ZC3H11AO75152 810 aaKnown RBP eCLIP6.75□□□□□ -1.33
USP28-202ENST00000535607 ESRRBO95718 433 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 GH2P01242 217 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 EIF2S1P05198 315 aaKnown RBP6.75□□□□□ -1.33
USP28-202ENST00000535607 SNHG28P0DPA3 235 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 HARSP12081 509 aaKnown RBP6.75□□□□□ -1.33
USP28-202ENST00000535607 VCLP18206 1134 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 IVDP26440 423 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 GTF2H1P32780 548 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 MC3RP41968 323 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 CD151P48509 253 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 VAMP7P51809 220 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 NR1H2P55055 460 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 NUP107P57740 925 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 PFKPQ01813 784 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 ENPEPQ07075 957 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 CDC16Q13042 620 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 ZBTB17Q13105 803 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 KRT81Q14533 505 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 PKN2Q16513 984 aaKnown RBP6.75□□□□□ -1.33
USP28-202ENST00000535607 CR1LQ2VPA4 569 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 BRDTQ58F21 947 aaPredicted RBP6.75□□□□□ -1.33
USP28-202ENST00000535607 CATSPEREQ5SY80 951 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 RARS2Q5T160 578 aaKnown RBP6.75□□□□□ -1.33
USP28-202ENST00000535607 ZFP1Q6P2D0 407 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 RFWD3Q6PCD5 774 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 GJB7Q6PEY0 223 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 RINLQ6ZS11 566 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 LHFPL2Q6ZUX7 228 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 CCDC80Q76M96 950 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 CATSPER3Q86XQ3 398 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 C12orf56Q8IXR9 622 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 FAM71AQ8IYT1 594 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 ULK2Q8IYT8 1036 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 NUP93Q8N1F7 819 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 FAM26EQ8N5C1 309 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 ALLCQ8N6M5 410 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 TERB1Q8NA31 727 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 ETNPPLQ8TBG4 499 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms