RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 FLT3P36888 993 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 IRAK1P51617 712 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 METAP1P53582 386 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 KDM7AQ6ZMT4 941 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 Q6ZSR6 202 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 STRADAQ7RTN6 431 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 TMC6Q7Z403 805 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 NOP9Q86U38 636 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 SPATS2Q86XZ4 545 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 OR4C6Q8NH72 309 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 ENOX1Q8TC92 643 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 EPS8L1Q8TE68 723 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 CXorf40AQ8TE69 158 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 RXFP2Q8WXD0 754 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 SCG3Q8WXD2 468 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 CASKIN2Q8WXE0 1202 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 ISG20Q96AZ6 181 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 ARRDC3Q96B67 414 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 GDAP1L1Q96MZ0 367 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 PSMB7Q99436 277 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 IL12RB2Q99665 862 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 EPAS1Q99814 870 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 C11orf70Q9BRQ4 267 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 TM6SF2Q9BZW4 377 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 CATSPERBQ9H7T0 1116 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 FZD3Q9NPG1 666 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 NLGN3Q9NZ94 848 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 ADAM22Q9P0K1 906 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 DNAI1Q9UI46 699 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 SNX10Q9Y5X0 201 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 TMEM131Q92545 1883 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 A0A087WV48 116 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 FAM170AA1A519 330 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 BUB1O43683 1085 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 PAK4O96013 591 aaPredicted RBP13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 MT-CO3P00414 261 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 CTSLP07711 333 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 GPD1P21695 349 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 ADRA1BP35368 520 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 NOMO3P69849 1222 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 SHBQ15464 509 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 ZNF284Q2VY69 593 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 ZNF805Q5CZA5 627 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 MIIPQ5JXC2 388 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 SCYL2Q6P3W7 929 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 DCUN1D2Q6PH85 259 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 KYAT3Q6YP21 454 aaKnown RBP13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 TTC7BQ86TV6 843 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 EMC1Q8N766 993 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 TMEM145Q8NBT3 493 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 CHST14Q8NCH0 376 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 OR13H1Q8NG92 308 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 OR2AP1Q8NGE2 309 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 OR52K2Q8NGK3 314 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 ATL2Q8NHH9 583 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 TPCN2Q8NHX9 752 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 FGF11Q92914 225 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 UBL7Q96S82 380 aaPredicted RBP13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 LGMNQ99538 433 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 OSBPL2Q9H1P3 480 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 NLRC4Q9NPP4 1024 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 SAMSN1Q9NSI8 373 aaKnown RBP13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 SPASTQ9UBP0 616 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 AJAP1Q9UKB5 411 aaPredicted RBP13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 CA5BQ9Y2D0 317 aa13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 FCF1Q9Y324 198 aaKnown RBP13.48□□□□□ -0.25
CLSTN3-205ENST00000535452 SMAD6O43541 496 aaKnown RBP13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 AP1G1O43747 822 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 PIAS2O75928 621 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 GSRP00390 522 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 CAPNS1P04632 268 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 GP1BAP07359 652 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 CKMT1AP12532 417 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 TFE3P19532 575 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 MMP8P22894 467 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 HTR1BP28222 390 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 BLKP51451 505 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 AIF1P55008 147 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 CLDN2P57739 230 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 TAS2R38P59533 333 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 NRG1Q02297 640 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 PDE1CQ14123 709 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 GRM3Q14832 879 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 SEL1L3Q68CR1 1132 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 ZCCHC8Q6NZY4 707 aaKnown RBP13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 DNAJC24Q6P3W2 148 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 SLFN11Q7Z7L1 901 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 MARCH9Q86YJ5 346 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 DENND6BQ8NEG7 585 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 MAPK15Q8TD08 544 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 FAM172AQ8WUF8 416 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 TSC1Q92574 1164 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 GRAMD1AQ96CP6 724 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 SLC13A1Q9BZW2 595 aa13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 NAT10Q9H0A0 1025 aaKnown RBP13.47□□□□□ -0.25
CLSTN3-205ENST00000535452 ANO10Q9NW15 660 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms