RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 RNASEH2AO75792 299 aaKnown RBP23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 PRNPP04156 253 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 TNNT1P13805 278 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 SERPINB6P35237 376 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 MPLP40238 635 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 CREB5Q02930 508 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 ZNF33AQ06730 810 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 SPEM2Q0P670 501 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 PAFAH1B3Q15102 231 aaKnown RBP23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 POM121L1PQ3SYA9 428 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 ARSIQ5FYB1 569 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 PLA2G2CQ5R387 149 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 CYP2U1Q7Z449 544 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 VSIG1Q86XK7 387 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 OR2AP1Q8NGE2 309 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 VOPP1Q96AW1 172 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 HSPA12BQ96MM6 686 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 OMDQ99983 421 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 HEPHQ9BQS7 1158 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 HECAQ9UBI9 543 aaPredicted RBP23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 LHX3Q9UBR4 397 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 TRIM10Q9UDY6 481 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 PLK4O00444 970 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 PSTPIP1O43586 416 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 MFSD11O43934 449 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 LEFTY1O75610 366 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 SEMA4FO95754 770 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 KRT1P04264 644 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 ITPKAP23677 461 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 SNRPD1P62314 119 aaKnown RBP23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 IL10RBQ08334 325 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 CCDC6Q16204 474 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 ATXN7L2Q5T6C5 722 aaPredicted RBP23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 CCDC112Q8NEF3 446 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 OR6K2Q8NGY2 324 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 GRIN3AQ8TCU5 1115 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 FOXJ1Q92949 421 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 ARRDC3Q96B67 414 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 RNF157Q96PX1 679 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 PCED1AQ9H1Q7 454 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 C6orf106Q9H6K1 298 aaPredicted RBP23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 SP110Q9HB58 689 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 DDX56Q9NY93 547 aaKnown RBP23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 ZNF292O60281 2723 aa23.1■■□□□ 1.29
SFSWAP-204ENST00000535399 GON4LQ3T8J9 2241 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 METTL12A8MUP2 240 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 GKP32189 559 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 RHOAP61586 193 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 MYLK3Q32MK0 819 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 DAAM2Q86T65 1068 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 LRRC8AQ8IWT6 810 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 PIGKQ92643 395 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 SEMA4GQ9NTN9 838 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 PILRBQ9UKJ0 227 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 ADGRG1Q9Y653 693 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 NUP205Q92621 2012 aa23.09■■□□□ 1.29
SFSWAP-204ENST00000535399 NUMA1Q14980 2115 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 C10orf142B7Z368 130 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 KPNA3O00505 521 aaPredicted RBP23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 ARHGAP6O43182 974 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 MAFKO60675 156 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 POP4O95707 220 aaKnown RBP23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 PEX11BO96011 259 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 ADPRHP54922 357 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 NAP1L1P55209 391 aaKnown RBP23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 KIF5AQ12840 1032 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 CNTN1Q12860 1018 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 RFTN1Q14699 578 aaPredicted RBP23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 AGBL4Q5VU57 503 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 PEAR1Q5VY43 1037 aaPredicted RBP23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 TXLNBQ8N3L3 684 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 RYBPQ8N488 228 aaPredicted RBP23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 LRRC57Q8N9N7 239 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 RNF25Q96BH1 459 aaPredicted RBP23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 GDAP1L1Q96MZ0 367 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 SMOC1Q9H4F8 434 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 ZDHHC6Q9H6R6 413 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 TMEM74BQ9NUR3 256 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 THADAQ6YHU6 1953 aa23.08■■□□□ 1.29
SFSWAP-204ENST00000535399 GRID2IPA4D2P6 1211 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 SLC7A4O43246 635 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 PALMO75781 387 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 IGSF6O95976 241 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 MARCKSL1P49006 195 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 GBE1Q04446 702 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 GALNT2Q10471 571 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 CSRP2Q16527 193 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 TAZQ16635 292 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 DCAF12L1Q5VU92 463 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 NCEH1Q6PIU2 408 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 MFSD7Q6UXD7 560 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 LRRC49Q8IUZ0 686 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 SYT12Q8IV01 421 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 ATPAF2Q8N5M1 289 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 OR2T34Q8NGX1 318 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 OR14C36Q8NHC7 312 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 DNASE2BQ8WZ79 361 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 KRT35Q92764 455 aa23.07■■□□□ 1.28
SFSWAP-204ENST00000535399 ZNF599Q96NL3 588 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms