RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 RFTN1Q14699 578 aaPredicted RBP13.34□□□□□ -0.27
TMEM258-202ENST00000535042 MAP7D1Q3KQU3 841 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 TMCO4Q5TGY1 634 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 ZNF776Q68DI1 518 aaPredicted RBP13.34□□□□□ -0.27
TMEM258-202ENST00000535042 PLPP6Q8IY26 295 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 PGBD5Q8N414 524 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 TSEN2Q8NCE0 465 aaKnown RBP13.34□□□□□ -0.27
TMEM258-202ENST00000535042 CCNYQ8ND76 341 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 OR2AP1Q8NGE2 309 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 OR8D1Q8WZ84 308 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 MAML1Q92585 1016 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 PRCCQ92733 491 aaPredicted RBP13.34□□□□□ -0.27
TMEM258-202ENST00000535042 NSMCE3Q96MG7 304 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 FAM126AQ9BYI3 521 aaPredicted RBP13.34□□□□□ -0.27
TMEM258-202ENST00000535042 FBRSQ9HAH7 460 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 ITM2CQ9NQX7 267 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 KCND1Q9NSA2 647 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 HECAQ9UBI9 543 aaPredicted RBP13.34□□□□□ -0.27
TMEM258-202ENST00000535042 PPM1HQ9ULR3 514 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 WASF2Q9Y6W5 498 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 CKAP5Q14008 2032 aa13.34□□□□□ -0.27
TMEM258-202ENST00000535042 TTC24A2A3L6 582 aaPredicted RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 GOLGA6L9A6NEM1 432 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 APOC4-APOC2K7ER74 178 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 MATN3O15232 486 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 ALOX15BO15296 676 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 MID1O15344 667 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 ZBTB24O43167 697 aaPredicted RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 LILRB5O75023 590 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 IL1BP01584 269 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 APOC2P02655 101 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 ATP1A1P05023 1023 aaKnown RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 SLC8A1P32418 973 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 CETN2P41208 172 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 RECQLP46063 649 aaPredicted RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 PSMD8P48556 350 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 NR2C2P49116 596 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 NRLP54845 237 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 SNRPD1P62314 119 aaKnown RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 OTUD4Q01804 1114 aaKnown RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 PDK1Q15118 436 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 NOMO1Q15155 1222 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 CST6Q15828 149 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 MYLK3Q32MK0 819 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 POM121L1PQ3SYA9 428 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 ARSIQ5FYB1 569 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 METTL3Q86U44 580 aaKnown RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 ZC3H18Q86VM9 953 aaKnown RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 CCDC13Q8IYE1 715 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 RYBPQ8N488 228 aaPredicted RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 FAM160A2Q8N612 972 aaPredicted RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 TEX26Q8N6G2 289 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 PIP4K2CQ8TBX8 421 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 ACTL9Q8TC94 416 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 P3H4Q92791 437 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 PSKH2Q96QS6 385 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 HEPHQ9BQS7 1158 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 CINPQ9BW66 212 aaPredicted RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 KCNH6Q9H252 994 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 CARD9Q9H257 536 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 C10orf88Q9H8K7 445 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 USP36Q9P275 1121 aaKnown RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 SEPT3Q9UH03 358 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 EVLQ9UI08 416 aaPredicted RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 R3HDM2Q9Y2K5 976 aaKnown RBP13.33□□□□□ -0.28
TMEM258-202ENST00000535042 JRKLQ9Y4A0 524 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 R4GN57 208 aa13.33□□□□□ -0.28
TMEM258-202ENST00000535042 KCNK1O00180 336 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 PLK4O00444 970 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 RNASEH1O60930 286 aaKnown RBP13.32□□□□□ -0.28
TMEM258-202ENST00000535042 LEFTY1O75610 366 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 TJP3O95049 919 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 IGSF6O95976 241 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 CR2P20023 1033 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 CXCR5P32302 372 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 P2RY2P41231 377 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 MMP13P45452 471 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 TPMTP51580 245 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 MAXP61244 160 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 AP1B1Q10567 949 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 ZBTB17Q13105 803 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 HNRNPDQ14103 355 aaKnown RBP13.32□□□□□ -0.28
TMEM258-202ENST00000535042 PRKD1Q15139 912 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-202ENST00000535042 SEL1L2Q5TEA6 688 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 CCDC181Q5TID7 509 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 MARC1Q5VT66 337 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 TIGD7Q6NT04 549 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-202ENST00000535042 SLC13A5Q86YT5 568 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-202ENST00000535042 AADATQ8N5Z0 425 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 CNTD1Q8N815 330 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 GRIN3AQ8TCU5 1115 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 FATE1Q969F0 183 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 ARRDC3Q96B67 414 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 CCDC114Q96M63 670 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 GDAP1L1Q96MZ0 367 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 WDR24Q96S15 920 aa13.32□□□□□ -0.28
TMEM258-202ENST00000535042 PABPC3Q9H361 631 aaKnown RBP13.32□□□□□ -0.28
TMEM258-202ENST00000535042 ZDHHC6Q9H6R6 413 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms