RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PARVAQ9NVD7 372 aa9.19□□□□□ -0.94
SF3B2-216ENST00000534765 NINJ2Q9NZG7 142 aa9.19□□□□□ -0.94
SF3B2-216ENST00000534765 HESX1Q9UBX0 185 aa9.19□□□□□ -0.94
SF3B2-216ENST00000534765 FAM47E-STBD1D6RA91 191 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 PSMD12O00232 456 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 PROCP04070 461 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 MIPP30301 263 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 SERPINB1P30740 379 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 COILP38432 576 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 CDKN2BP42772 138 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 TGFBIQ15582 683 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 DCUN1D1Q96GG9 259 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 PRICKLE1Q96MT3 831 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 SEMA6AQ9H2E6 1030 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 COL4A4P53420 1690 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 C2CD4BA6NLJ0 364 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 C2CD2LO14523 706 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 STAU1O95793 577 aaKnown RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 TFAP2AP05549 437 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 HSPA1AP0DMV8 641 aaKnown RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 HSPA1BP0DMV9 641 aaKnown RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 RBP3P10745 1247 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 KRT3P12035 628 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 LCP1P13796 627 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 ITGB8P26012 769 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 BCAR1P56945 870 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 OCA2Q04671 838 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 UBAP2LQ14157 1087 aaKnown RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 SYPL2Q5VXT5 272 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 DNAJC24Q6P3W2 148 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 ATG14Q6ZNE5 492 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 ZNF598Q86UK7 904 aaKnown RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 CPNE9Q8IYJ1 553 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 SDR16C5Q8N3Y7 309 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 TTC9BQ8N6N2 239 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 TMEM35BQ8NCS4 154 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 PMEPA1Q969W9 287 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 TBATAQ96M53 351 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 C11orf84Q9BUA3 381 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 NT5C1AQ9BXI3 368 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 DCLK3Q9C098 648 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 S100A14Q9HCY8 104 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 MTO1Q9Y2Z2 717 aaKnown RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 TIMM22Q9Y584 194 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 ST14Q9Y5Y6 855 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 TCRBV7S3A2A0A539 114 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 ARHGEF37A1IGU5 675 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 ANKRD34BA5PLL1 514 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 LPXNO60711 386 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 MYO1DO94832 1006 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 NR4A2P43354 598 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 CDK16Q00536 496 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 FAM102AQ5T9C2 384 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 GALNT18Q6P9A2 607 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 RFPL4BQ6ZWI9 263 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 PDSS2Q86YH6 399 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 DEFB107AQ8IZN7 70 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 ADAM32Q8TC27 787 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 RXFP2Q8WXD0 754 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 VTI1AQ96AJ9 217 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 SCLYQ96I15 445 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 PGLYRP2Q96PD5 576 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 ZNF518BQ9C0D4 1074 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 FNDC1Q4ZHG4 1894 aaPredicted RBP9.18□□□□□ -0.94
SF3B2-216ENST00000534765 PATJQ8NI35 1801 aa9.18□□□□□ -0.94
SF3B2-216ENST00000534765 GOLGA8QA0A0J9YX86 632 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 GABRDO14764 452 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 AIM2O14862 343 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 HMGCRP04035 888 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 CST5P28325 142 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 ARSEP51690 589 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 PDIA2Q13087 525 aaKnown RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 ARL13BQ3SXY8 428 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 RALGPS1Q5JS13 557 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 CCDC81Q6ZN84 652 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 DENND5BQ6ZUT9 1274 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 PALM2Q8IXS6 379 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 CCDC185Q8N715 623 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 C12orf50Q8NA57 414 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 SMOQ99835 787 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 KATNAL1Q9BW62 490 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 GDAP2Q9NXN4 497 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 RPL26L1Q9UNX3 145 aaKnown RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 LSM8O95777 96 aaKnown RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 DLGAP3O95886 979 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 CHRNB1P11230 501 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 GNL1P36915 607 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 EIF3EP60228 445 aaKnown RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 STAT4Q14765 748 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 FASTKD3Q14CZ7 662 aaKnown RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 TLR1Q15399 786 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 FAM209AQ5JX71 171 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 DEPDC1Q5TB30 811 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 Q6ZNX1 250 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 NET1Q7Z628 596 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 ADGRF2Q8IZF7 708 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 TCP10LQ8TDR4 215 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 BCL7CQ8WUZ0 217 aaPredicted RBP9.17□□□□□ -0.94
SF3B2-216ENST00000534765 HTRA1Q92743 480 aa9.17□□□□□ -0.94
SF3B2-216ENST00000534765 SNF8Q96H20 258 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms