RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 ARHGEF38Q9NXL2 777 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 MYRFQ9Y2G1 1151 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 RNF11Q9Y3C5 154 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 PSAT1Q9Y617 370 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 GOLGA8QA0A0J9YX86 632 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 A0A1B0GTW7 788 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 GOLGA8OA6NCC3 632 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 GOLGA8NF8WBI6 632 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 H3BNH8 94 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 CBFA2T3O75081 653 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 RNASEH2AO75792 299 aaKnown RBP9.04□□□□□ -0.96
SORL1-213ENST00000534754 P4HA1P13674 534 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 SELPP16109 830 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 ZNF26P17031 533 aaPredicted RBP9.04□□□□□ -0.96
SORL1-213ENST00000534754 GPD2P43304 727 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 HK2P52789 917 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 CDH8P55286 799 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 CRADDP78560 199 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 PLOD1Q02809 727 aaPredicted RBP9.04□□□□□ -0.96
SORL1-213ENST00000534754 MBTD1Q05BQ5 628 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 SLC10A2Q12908 348 aaPredicted RBP9.04□□□□□ -0.96
SORL1-213ENST00000534754 BFSP2Q13515 415 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 RFTN1Q14699 578 aaPredicted RBP9.04□□□□□ -0.96
SORL1-213ENST00000534754 MGAT5BQ3V5L5 792 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 FBXO47Q5MNV8 452 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 OR6B2Q6IFH4 312 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 NAPRTQ6XQN6 538 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 CPSF7Q8N684 471 aaKnown RBP9.04□□□□□ -0.96
SORL1-213ENST00000534754 RSPH1Q8WYR4 309 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 USP13Q92995 863 aaPredicted RBP9.04□□□□□ -0.96
SORL1-213ENST00000534754 PGBD4Q96DM1 585 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 ZNF597Q96LX8 424 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 KLHL32Q96NJ5 620 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 QKIQ96PU8 341 aaKnown RBP eCLIP9.04□□□□□ -0.96
SORL1-213ENST00000534754 EFCAB1Q9HAE3 211 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 NGRNQ9NPE2 291 aaKnown RBP9.04□□□□□ -0.96
SORL1-213ENST00000534754 SNX15Q9NRS6 342 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 PNPLA3Q9NST1 481 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 ZNF358Q9NW07 568 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 CPSF3Q9UKF6 684 aaKnown RBP9.04□□□□□ -0.96
SORL1-213ENST00000534754 ADAM28Q9UKQ2 775 aa9.04□□□□□ -0.96
SORL1-213ENST00000534754 NLRC5Q86WI3 1866 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 TMEM221A6NGB7 291 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 ZNF487B1APH4 448 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 MATN2O00339 956 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 NEMP1O14524 444 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 ACOT8O14734 319 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 XPO1O14980 1071 aaKnown RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 HDAC3O15379 428 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 TRIM13O60858 407 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 TADA2AO75478 443 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 SUPT3HO75486 399 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 DGKIO75912 1065 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 TIMP1P01033 207 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 KRT19P08727 400 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 DARSP14868 501 aaKnown RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 CD1EP15812 388 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 ZFXP17010 805 aaPredicted RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 CYP2F1P24903 491 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 EPHA3P29320 983 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 NR2C2P49116 596 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 RGS19P49795 217 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 EFNA5P52803 228 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 CRYBB1P53674 252 aaPredicted RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 SESN2P58004 480 aaPredicted RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 NRF1Q16656 503 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 PPP6R3Q5H9R7 873 aaPredicted RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 GRTP1Q5TC63 336 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 SEL1L3Q68CR1 1132 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 HEATR6Q6AI08 1181 aaKnown RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 KRT80Q6KB66 452 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 FAM183BPQ6ZVS7 135 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 CARM1Q86X55 608 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 IFNLR1Q8IU57 520 aaPredicted RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 RNF148Q8N7C7 305 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 HM13Q8TCT9 377 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 AGR3Q8TD06 166 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 DPF3Q92784 378 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 TMIGD2Q96BF3 282 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 RMND5BQ96G75 393 aaPredicted RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 TMEM176AQ96HP8 235 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 CPNE1Q99829 537 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 SNRNP25Q9BV90 132 aaKnown RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 PDZD7Q9H5P4 517 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 WDR55Q9H6Y2 383 aaPredicted RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 CAAP1Q9H8G2 361 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 LIN28AQ9H9Z2 209 aaKnown RBP9.03□□□□□ -0.96
SORL1-213ENST00000534754 TMEM165Q9HC07 324 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 VPS45Q9NRW7 570 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 IGSF9Q9P2J2 1179 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 ZNF711Q9Y462 761 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 E2F8A0AVK6 867 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 C7orf72A4D263 438 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 G3V2L1 256 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 DPYSL4O14531 572 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 MDM4O15151 490 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 B4GALT5O43286 388 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 GRAP2O75791 330 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 CSF2RAP15509 400 aa9.03□□□□□ -0.96
SORL1-213ENST00000534754 PTPN1P18031 435 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms