RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 I6L893 689 aaPredicted RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 RNF8O76064 485 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 ITGAVP06756 1048 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 ALPPL2P10696 532 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 RFC1P35251 1148 aaPredicted RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 RABIFP47224 123 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 ZNF165P49910 485 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 DUSP3P51452 185 aaPredicted RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 RENBPP51606 427 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 ARF5P84085 180 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 DCUN1D2Q6PH85 259 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 Q6ZVU0 165 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 RAVER1Q8IY67 606 aaKnown RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 OR52K2Q8NGK3 314 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 SETD7Q8WTS6 366 aaKnown RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 ZNF641Q96N77 438 aaPredicted RBP10.59□□□□□ -0.71
CSDE1-217ENST00000534699 SLC6A18Q96N87 628 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 FUCA2Q9BTY2 467 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 DUSP23Q9BVJ7 150 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 HAUS2Q9NVX0 235 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 SERGEFQ9UGK8 458 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 NEU3Q9UQ49 428 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 WASF2Q9Y6W5 498 aa10.59□□□□□ -0.71
CSDE1-217ENST00000534699 PTPRBP23467 1997 aa10.58□□□□□ -0.71
CSDE1-217ENST00000534699 ARHGAP42A6NI28 874 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 LRIG2O94898 1065 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 LDOC1O95751 146 aaPredicted RBP10.58□□□□□ -0.72
CSDE1-217ENST00000534699 TPM3P06753 285 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 TFE3P19532 575 aaPredicted RBP10.58□□□□□ -0.72
CSDE1-217ENST00000534699 ELP6Q0PNE2 266 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 PTK2BQ14289 1009 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 NR1I3Q14994 352 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 ZNF284Q2VY69 593 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 ANO6Q4KMQ2 910 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 JOSD2Q8TAC2 188 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 WDR48Q8TAF3 677 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 SCNM1Q9BWG6 230 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 ISCUQ9H1K1 167 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 RCOR3Q9P2K3 495 aaPredicted RBP10.58□□□□□ -0.72
CSDE1-217ENST00000534699 FADS3Q9Y5Q0 445 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 H3BM21 787 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 ENC1O14682 589 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 EPHB6O15197 1021 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 CCP110O43303 1012 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 IRAK1P51617 712 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 NSUN2Q08J23 767 aaKnown RBP eCLIP10.58□□□□□ -0.72
CSDE1-217ENST00000534699 TRIM14Q14142 442 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 SMAD1Q15797 465 aaKnown RBP10.58□□□□□ -0.72
CSDE1-217ENST00000534699 TMEM52BQ4KMG9 183 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 HS1BP3Q53T59 392 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 NIPA2Q8N8Q9 360 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 FAM181AQ8N9Y4 354 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 TEKT4Q8WW24 435 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 TSC1Q92574 1164 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 ARRDC3Q96B67 414 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 C1QTNF2Q9BXJ5 285 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 TTYH3Q9C0H2 523 aa10.58□□□□□ -0.72
CSDE1-217ENST00000534699 CBX4O00257 560 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 TPP1O14773 563 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 SRGAP2O75044 1071 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 ADRB3P13945 408 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 ACP1P24666 158 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 KLK7P49862 253 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 TAS2R38P59533 333 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 ATP11AP98196 1134 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 ZNF211Q13398 564 aaPredicted RBP10.57□□□□□ -0.72
CSDE1-217ENST00000534699 SERINC3Q13530 473 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 PIGHQ14442 188 aaPredicted RBP10.57□□□□□ -0.72
CSDE1-217ENST00000534699 IQCB1Q15051 598 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 MYLK3Q32MK0 819 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 BOLA3Q53S33 107 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 HSP90AA4PQ58FG1 418 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 ERMARDQ5T6L9 678 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 AFMIDQ63HM1 303 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 DNAAF5Q86Y56 855 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 OR7D4Q8NG98 312 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 FATE1Q969F0 183 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 SPON2Q9BUD6 331 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 MTG2Q9H4K7 406 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 MPP6Q9NZW5 540 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 TMEM63CQ9P1W3 806 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 SARDHQ9UL12 918 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 SPTBN4Q9H254 2564 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 SPAARA0A1B0GVQ0 90 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 NEMP2A6NFY4 417 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 TMEM191CA6NGB0 347 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 KPNA3O00505 521 aaPredicted RBP10.57□□□□□ -0.72
CSDE1-217ENST00000534699 SNAP91O60641 907 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 ZNF821O75541 412 aaPredicted RBP10.57□□□□□ -0.72
CSDE1-217ENST00000534699 WNT1P04628 370 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 GP1BAP07359 652 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 HOXC4P09017 264 aaPredicted RBP10.57□□□□□ -0.72
CSDE1-217ENST00000534699 HNF1BP35680 557 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 PEX5P50542 639 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 CCNHP51946 323 aaPredicted RBP10.57□□□□□ -0.72
CSDE1-217ENST00000534699 MAMLD1Q13495 774 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 FBXL19Q6PCT2 694 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 DPY19L3Q6ZPD9 716 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 TMC6Q7Z403 805 aa10.57□□□□□ -0.72
CSDE1-217ENST00000534699 EMC1Q8N766 993 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms