RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 NUP107P57740 925 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 SLC10A6Q3KNW5 377 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 BBS12Q6ZW61 710 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 CATSPER2Q96P56 530 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 SEMA3CQ99985 751 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 ETAA1Q9NY74 926 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 DUX4Q9UBX2 424 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 MAFFQ9ULX9 164 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 COPG1Q9Y678 874 aaKnown RBP11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 ARFGEF2Q9Y6D5 1785 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 IRAK2O43187 625 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 ELFN1P0C7U0 828 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 TSHRP16473 764 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 TKTP29401 623 aaKnown RBP11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 SLC29A2Q14542 456 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 C11orf96Q7Z7L8 435 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 GLIS3Q8NEA6 775 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 ZNF555Q8NEP9 628 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 FAM126AQ9BYI3 521 aaPredicted RBP11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 ARMC7Q9H6L4 198 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 ARHGEF4Q9NR80 690 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D3DA0A087WVF3 549 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D3IA0A087WXS9 549 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D3EA0A087X179 549 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D3KA0A087X1G2 549 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D3FA6NER0 549 aaPredicted RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 URADA6NGE7 173 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D3LB9A6J9 549 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D3HP0C7X1 549 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 PTPN9P43378 593 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 CCNG1P51959 295 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TCEA2Q15560 299 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 HLA-DQA1Q5Y7H0 255 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D3GQ6DHY5 549 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D3CQ6IPX1 549 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 ANKS1BQ7Z6G8 1248 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 SERINC5Q86VE9 423 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 CACUL1Q86Y37 369 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D3Q8IZP1 549 aaPredicted RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 KLHL25Q9H0H3 589 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 ASB8Q9H765 288 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 FANCEQ9HB96 536 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 MARCOQ9UEW3 520 aaPredicted RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 EFR3BQ9Y2G0 817 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 PMM2O15305 246 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 GNSP15586 552 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 LPOP22079 712 aaPredicted RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 DGKGP49619 791 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 ZBED3Q96IU2 234 aaPredicted RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 CNBD2Q96M20 576 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 KRCC1Q9NPI7 259 aaPredicted RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 C6orf203Q9P0P8 240 aaPredicted RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 CNTN3Q9P232 1028 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 ARIH1Q9Y4X5 557 aaPredicted RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 YIPF1Q9Y548 306 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 CPQQ9Y646 472 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 HNRNPRO43390 633 aaKnown RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 CCNDBP1O95273 360 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 OR4Q2P0C623 313 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 ALPPL2P10696 532 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 CDK18Q07002 472 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 STX5Q13190 355 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 DNAJC3Q13217 504 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 ZNF470Q6ECI4 717 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 HORMAD1Q86X24 394 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 CELF5Q8N6W0 485 aaKnown RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 C12orf29Q8N999 325 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 AGR3Q8TD06 166 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 CYGBQ8WWM9 190 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 KCTD13Q8WZ19 329 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 NECTIN4Q96NY8 510 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 TM6SF2Q9BZW4 377 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 LACRTQ9GZZ8 138 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 RGS17Q9UGC6 210 aaPredicted RBP11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 C15orf41Q9Y2V0 281 aa11.4□□□□□ -0.58
AMBRA1-211ENST00000533727 A0A087X1B8 175 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 WBP4O75554 376 aaKnown RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 ATG7O95352 703 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 CD86P42081 329 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 AP1S1P61966 158 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 FOXD4Q12950 439 aaPredicted RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 CCDC153Q494R4 210 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 CDCA2Q69YH5 1023 aaPredicted RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 SLC39A5Q6ZMH5 540 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 MYO19Q96H55 970 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 INTS7Q9NVH2 962 aaKnown RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 PKD1L3Q7Z443 1732 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 C1RP00736 705 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 SOD2P04179 222 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 SLC35G4P0C7Q5 338 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 HPGDP15428 266 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 RBL1P28749 1068 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 SCNN1AP37088 669 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 CACNA2D1P54289 1103 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 IL2P60568 153 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 MIIPQ5JXC2 388 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 NEPROQ6NW34 567 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 DQX1Q8TE96 717 aaKnown RBP11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 POLG2Q9UHN1 485 aa11.39□□□□□ -0.59
AMBRA1-211ENST00000533727 TDRKHQ9Y2W6 561 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms