RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 BIRC7Q96CA5 298 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 ARHGEF26Q96DR7 871 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 PPP1R16AQ96I34 528 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 KCTD15Q96SI1 283 aaPredicted RBP16.71■□□□□ 0.27
RDX-214ENST00000533678 BAG1Q99933 345 aaPredicted RBP16.71■□□□□ 0.27
RDX-214ENST00000533678 MIR1-1HGQ9H1L0 117 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 NOL6Q9H6R4 1146 aaKnown RBP16.71■□□□□ 0.27
RDX-214ENST00000533678 LRRC19Q9H756 370 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 DYRK4Q9NR20 520 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 GPATCH2LQ9NWQ4 482 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 CTTNBP2NLQ9P2B4 639 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 SERGEFQ9UGK8 458 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 EIF2B4Q9UI10 523 aaKnown RBP16.71■□□□□ 0.27
RDX-214ENST00000533678 SARDHQ9UL12 918 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 PCDH15Q96QU1 1955 aa16.71■□□□□ 0.27
RDX-214ENST00000533678 CHD8Q9HCK8 2581 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 ARHGAP42A6NI28 874 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 C10orf142B7Z368 130 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 H3BRJ5 948 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 ARHGAP33O14559 1287 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 PLRG1O43660 514 aaKnown RBP16.7■□□□□ 0.26
RDX-214ENST00000533678 BUB1O43683 1085 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 FSBPO95073 299 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 GSRP00390 522 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 NUDT1P36639 197 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 ARL4AP40617 200 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 SNRPD1P62314 119 aaKnown RBP16.7■□□□□ 0.26
RDX-214ENST00000533678 NCEH1Q6PIU2 408 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 DPY19L3Q6ZPD9 716 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 CCDC170Q8IYT3 715 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 C1orf216Q8TAB5 229 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 HMCESQ96FZ2 354 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 HEPHQ9BQS7 1158 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 TNKS2Q9H2K2 1166 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 SPTLC3Q9NUV7 552 aa16.7■□□□□ 0.26
RDX-214ENST00000533678 FCF1Q9Y324 198 aaKnown RBP16.7■□□□□ 0.26
RDX-214ENST00000533678 FAM47DPA6NHR8 397 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 C4orf47A7E2U8 309 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 CDX4O14627 284 aaPredicted RBP16.69■□□□□ 0.26
RDX-214ENST00000533678 TM4SF5O14894 197 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 IGHV4-34P06331 123 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 CTSLP07711 333 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 ERCC2P18074 760 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 IL1R2P27930 398 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 DNA2P51530 1060 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 AFF3P51826 1226 aaKnown RBP16.69■□□□□ 0.26
RDX-214ENST00000533678 CNTN1Q12860 1018 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 TEAD4Q15561 434 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 ARSIQ5FYB1 569 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 NEK5Q6P3R8 708 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 IL27RAQ6UWB1 636 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 ZCCHC9Q8N567 271 aaKnown RBP16.69■□□□□ 0.26
RDX-214ENST00000533678 CHST14Q8NCH0 376 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 SNX19Q92543 992 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 BTBD6Q96KE9 485 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 OSBPL1AQ9BXW6 950 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 HDAC8Q9BY41 377 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 PREBQ9HCU5 417 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 CWC15Q9P013 229 aaKnown RBP16.69■□□□□ 0.26
RDX-214ENST00000533678 HECAQ9UBI9 543 aaPredicted RBP16.69■□□□□ 0.26
RDX-214ENST00000533678 INTUQ9ULD6 942 aa16.69■□□□□ 0.26
RDX-214ENST00000533678 TBC1D3DA0A087WVF3 549 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 TBC1D3IA0A087WXS9 549 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 TBC1D3EA0A087X179 549 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 TBC1D3KA0A087X1G2 549 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 A0A1W2PPC4 97 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 TBC1D3FA6NER0 549 aaPredicted RBP16.68■□□□□ 0.26
RDX-214ENST00000533678 TBC1D3LB9A6J9 549 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 KPNA3O00505 521 aaPredicted RBP16.68■□□□□ 0.26
RDX-214ENST00000533678 LEFTY1O75610 366 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 PROSCO94903 275 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 POP4O95707 220 aaKnown RBP16.68■□□□□ 0.26
RDX-214ENST00000533678 TBC1D3HP0C7X1 549 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 RARAP10276 462 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 MAN1A1P33908 653 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 ARHGAP25P42331 645 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 CCNHP51946 323 aaPredicted RBP16.68■□□□□ 0.26
RDX-214ENST00000533678 SLC25A11Q02978 314 aaKnown RBP16.68■□□□□ 0.26
RDX-214ENST00000533678 RAD51Q06609 339 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 DPYSQ14117 519 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 KCNT1Q5JUK3 1230 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 AGBL4Q5VU57 503 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 AFMIDQ63HM1 303 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 TBC1D3GQ6DHY5 549 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 TBC1D3CQ6IPX1 549 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 ERN2Q76MJ5 926 aaKnown RBP16.68■□□□□ 0.26
RDX-214ENST00000533678 POLNQ7Z5Q5 900 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 PRPF39Q86UA1 669 aaKnown RBP16.68■□□□□ 0.26
RDX-214ENST00000533678 RHOT2Q8IXI1 618 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 TBC1D3Q8IZP1 549 aaPredicted RBP16.68■□□□□ 0.26
RDX-214ENST00000533678 TXLNBQ8N3L3 684 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 OR2AP1Q8NGE2 309 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 HSPH1Q92598 858 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 SLC39A8Q9C0K1 460 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.68■□□□□ 0.26
RDX-214ENST00000533678 RCOR3Q9P2K3 495 aaPredicted RBP16.68■□□□□ 0.26
RDX-214ENST00000533678 WASF2Q9Y6W5 498 aa16.68■□□□□ 0.26
RDX-214ENST00000533678 CACNA1EQ15878 2313 aa16.67■□□□□ 0.26
RDX-214ENST00000533678 LATO43561 262 aa16.67■□□□□ 0.26
RDX-214ENST00000533678 TMCC1O94876 653 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms