RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 COMTD1Q86VU5 262 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 RASGEF1CQ8N431 466 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 RAB3IPQ96QF0 476 aaPredicted RBP6.97□□□□□ -1.29
BDNF-217ENST00000533131 TMEM47Q9BQJ4 181 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 NUSAP1Q9BXS6 441 aaKnown RBP6.97□□□□□ -1.29
BDNF-217ENST00000533131 RIBC2Q9H4K1 309 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 MLXIPLQ9NP71 852 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 TREM1Q9NP99 234 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 PNO1Q9NRX1 252 aaKnown RBP6.97□□□□□ -1.29
BDNF-217ENST00000533131 SENP1Q9P0U3 644 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 ANKMY1Q9P2S6 941 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 SALL4Q9UJQ4 1053 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 KIF1AQ12756 1690 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.97□□□□□ -1.29
BDNF-217ENST00000533131 A0A087WUV0 522 aaPredicted RBP6.97□□□□□ -1.29
BDNF-217ENST00000533131 E9PMD0 336 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 MYO1FO00160 1098 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 HDAC3O15379 428 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 ASAP2O43150 1006 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 POP4O95707 220 aaKnown RBP6.97□□□□□ -1.29
BDNF-217ENST00000533131 SCGB1D1O95968 90 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 SERPINA3P01011 423 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 MFAP3P55082 362 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 GAS6Q14393 721 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 ZDHHC17Q8IUH5 632 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 DTWD2Q8NBA8 298 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 OR1N1Q8NGS0 311 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 STK32BQ9NY57 414 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 SPATA31A3Q5VYP0 1347 aa6.97□□□□□ -1.29
BDNF-217ENST00000533131 PHRF1Q9P1Y6 1649 aaKnown RBP6.97□□□□□ -1.29
BDNF-217ENST00000533131 FAM237BA0A1B0GVD1 139 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 GOLGA8OA6NCC3 632 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 BTBD17A6NE02 478 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 GOLGA8NF8WBI6 632 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 DNPH1O43598 174 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 TLR2O60603 784 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 CLPTM1O96005 669 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 NR1D1P20393 614 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 BTDP43251 543 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 GATMP50440 423 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 CDH8P55286 799 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 ERVK-9P63128 1117 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 LMAN2Q12907 356 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 CBFBQ13951 182 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 GRIK4Q16099 956 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 AAK1Q2M2I8 961 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 MFSD14BQ5SR56 506 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 GKAP1Q5VSY0 366 aaPredicted RBP6.96□□□□□ -1.29
BDNF-217ENST00000533131 ARMC6Q6NXE6 501 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 THSD4Q6ZMP0 1018 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 TRIM72Q6ZMU5 477 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 CYP4V2Q6ZWL3 525 aaPredicted RBP6.96□□□□□ -1.29
BDNF-217ENST00000533131 TMEM200AQ86VY9 491 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 AGBL5Q8NDL9 886 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 OR8K3Q8NH51 312 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 WDR48Q8TAF3 677 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 RPGRIP1Q96KN7 1286 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 TRIM9Q9C026 710 aa6.96□□□□□ -1.29
BDNF-217ENST00000533131 ARPP21Q9UBL0 812 aaPredicted RBP6.96□□□□□ -1.29
BDNF-217ENST00000533131 SMG5Q9UPR3 1016 aaKnown RBP6.96□□□□□ -1.29
BDNF-217ENST00000533131 CNTNAP5Q8WYK1 1306 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 SLC22A31A6NKX4 558 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 H0YIV9 168 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 PHGDHO43175 533 aaKnown RBP6.96□□□□□ -1.3
BDNF-217ENST00000533131 CLTAP09496 248 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 RALBP11234 206 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 ZFXP17010 805 aaPredicted RBP6.96□□□□□ -1.3
BDNF-217ENST00000533131 GLRA2P23416 452 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 NRIP1P48552 1158 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 ARHGDIBP52566 201 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 ARHGAP8P85298 464 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 SP4Q02446 784 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 CHIT1Q13231 466 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 MAN2A1Q16706 1144 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 PPP6R3Q5H9R7 873 aaPredicted RBP6.96□□□□□ -1.3
BDNF-217ENST00000533131 CLVS2Q5SYC1 327 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 THOC7Q6I9Y2 204 aaKnown RBP6.96□□□□□ -1.3
BDNF-217ENST00000533131 SNRNP48Q6IEG0 339 aaKnown RBP6.96□□□□□ -1.3
BDNF-217ENST00000533131 H1FNTQ75WM6 255 aaPredicted RBP6.96□□□□□ -1.3
BDNF-217ENST00000533131 MCEMP1Q8IX19 187 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 SEPT12Q8IYM1 358 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 MYCBPAPQ8TBZ2 947 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 ZNF558Q96NG5 402 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 KLHL25Q9H0H3 589 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 SLC32A1Q9H598 525 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 SPACA1Q9HBV2 294 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 POLE3Q9NRF9 147 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 SNX12Q9UMY4 172 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 RUVBL1Q9Y265 456 aaKnown RBP6.96□□□□□ -1.3
BDNF-217ENST00000533131 RWDD3Q9Y3V2 267 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 ZNF804BA4D1E1 1349 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 A0A096LPE4 126 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 A0A1W2PPZ6 126 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 CD3EAPO15446 510 aaKnown RBP6.96□□□□□ -1.3
BDNF-217ENST00000533131 OR5F1O95221 314 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 ALPPP05187 535 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 UGT2B4P06133 528 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 ALPPL2P10696 532 aa6.96□□□□□ -1.3
BDNF-217ENST00000533131 AZGP1P25311 298 aaKnown RBP6.96□□□□□ -1.3
BDNF-217ENST00000533131 GRK4P32298 578 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms