RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 CARD16Q5EG05 197 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 DPY19L3Q6ZPD9 716 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 TRIM69Q86WT6 500 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 PSTKQ8IV42 348 aaKnown RBP16.97■□□□□ 0.31
PKP3-209ENST00000533069 CASKIN2Q8WXE0 1202 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 HDAC8Q9BY41 377 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 GAREM1Q9H706 876 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 LUC7LQ9NQ29 371 aaKnown RBP16.97■□□□□ 0.31
PKP3-209ENST00000533069 AP4E1Q9UPM8 1137 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 ANKRD6Q9Y2G4 727 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 FCF1Q9Y324 198 aaKnown RBP16.97■□□□□ 0.31
PKP3-209ENST00000533069 CEP192Q8TEP8 1941 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 VILLO15195 856 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 KDELR3O43731 214 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 CD160O95971 181 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 GSRP00390 522 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 DNA2P51530 1060 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 CCNHP51946 323 aaPredicted RBP16.96■□□□□ 0.31
PKP3-209ENST00000533069 C21orf59P57076 290 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 ACAP1Q15027 740 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 KIF19Q2TAC6 998 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 POM121L1PQ3SYA9 428 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 SLC45A4Q5BKX6 768 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 ERMARDQ5T6L9 678 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 PIP5KL1Q5T9C9 394 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 NEK5Q6P3R8 708 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 PRPF39Q86UA1 669 aaKnown RBP16.96■□□□□ 0.31
PKP3-209ENST00000533069 DNAAF5Q86Y56 855 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 UMODL1-AS1Q8N2C9 162 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 CHST14Q8NCH0 376 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 GRIN3AQ8TCU5 1115 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 LRIG1Q96JA1 1093 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 CCDC42Q96M95 316 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 SLC6A18Q96N87 628 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 HEPHQ9BQS7 1158 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 MYO1AQ9UBC5 1043 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 DMTF1Q9Y222 760 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 PCDHGB2Q9Y5G2 931 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 WASF2Q9Y6W5 498 aa16.96■□□□□ 0.31
PKP3-209ENST00000533069 NYNRINQ9P2P1 1898 aaKnown RBP16.95■□□□□ 0.3
PKP3-209ENST00000533069 PLK4O00444 970 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 GIPC1O14908 333 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 DFNA5O60443 496 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 LRCH4O75427 683 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 LEFTY1O75610 366 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 ITGB7P26010 798 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 PMLP29590 882 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 MIPP30301 263 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 PCK1P35558 622 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 CTSKP43235 329 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 PPP2CBP62714 309 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 PPP2CAP67775 309 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 INO80DQ53TQ3 878 aaPredicted RBP16.95■□□□□ 0.3
PKP3-209ENST00000533069 ARSIQ5FYB1 569 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 NAPEPLDQ6IQ20 393 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 ERN2Q76MJ5 926 aaKnown RBP16.95■□□□□ 0.3
PKP3-209ENST00000533069 ZNF354CQ86Y25 554 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 NAXDQ8IW45 347 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 ARFGAP1Q8N6T3 406 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 ARRDC3Q96B67 414 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 SERAC1Q96JX3 654 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 SNRNP25Q9BV90 132 aaKnown RBP16.95■□□□□ 0.3
PKP3-209ENST00000533069 TRIM7Q9C029 511 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 DEF6Q9H4E7 631 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 DHX35Q9H5Z1 703 aaKnown RBP16.95■□□□□ 0.3
PKP3-209ENST00000533069 NOL6Q9H6R4 1146 aaKnown RBP16.95■□□□□ 0.3
PKP3-209ENST00000533069 EBF2Q9HAK2 575 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 AASDHPPTQ9NRN7 309 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 TM7SF3Q9NS93 570 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 PCSK1NQ9UHG2 260 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 FNDC3AQ9Y2H6 1198 aaKnown RBP16.95■□□□□ 0.3
PKP3-209ENST00000533069 SNX11Q9Y5W9 270 aa16.95■□□□□ 0.3
PKP3-209ENST00000533069 RASA4BC9J798 803 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 EEF2KO00418 725 aaKnown RBP16.94■□□□□ 0.3
PKP3-209ENST00000533069 RASA4O43374 803 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 BUB1O43683 1085 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 CD38P28907 300 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 NEK3P51956 506 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 NDST2P52849 883 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 TAS2R38P59533 333 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 SNRPD1P62314 119 aaKnown RBP16.94■□□□□ 0.3
PKP3-209ENST00000533069 SERINC3Q13530 473 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 PIGHQ14442 188 aaPredicted RBP16.94■□□□□ 0.3
PKP3-209ENST00000533069 ZNF423Q2M1K9 1284 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 SETMARQ53H47 684 aaPredicted RBP16.94■□□□□ 0.3
PKP3-209ENST00000533069 TMEM139Q8IV31 216 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 OR2AP1Q8NGE2 309 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 HMCESQ96FZ2 354 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 PEBP4Q96S96 227 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 TM6SF2Q9BZW4 377 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 NHEJ1Q9H9Q4 299 aaPredicted RBP16.94■□□□□ 0.3
PKP3-209ENST00000533069 IL21RQ9HBE5 538 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 GPATCH2LQ9NWQ4 482 aa16.94■□□□□ 0.3
PKP3-209ENST00000533069 HECAQ9UBI9 543 aaPredicted RBP16.94■□□□□ 0.3
PKP3-209ENST00000533069 A0A087X0T9 212 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 FAM228BP0C875 321 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 CCT8P50990 548 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 CCZ1BP86790 482 aa16.93■□□□□ 0.3
PKP3-209ENST00000533069 CCZ1P86791 482 aaPredicted RBP16.93■□□□□ 0.3
PKP3-209ENST00000533069 SHC2P98077 582 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms