RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CLK2P49760 499 aaKnown RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 NME5P56597 212 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 CRY1Q16526 586 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 SLC25A52Q3SY17 297 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 PHF13Q86YI8 300 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 PSTKQ8IV42 348 aaKnown RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 KRT78Q8N1N4 520 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 MCCC1Q96RQ3 725 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 TMEM120AQ9BXJ8 343 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 NMRAL1Q9HBL8 299 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 ACP6Q9NPH0 428 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 TMPRSS4Q9NRS4 437 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 GPN3Q9UHW5 284 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 SHPRHQ149N8 1683 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 CPSF4O95639 269 aaKnown RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 IFNA14P01570 189 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 GSNP06396 782 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 SLC35G4P0C7Q5 338 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 PRKAA2P54646 552 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 MEA1Q16626 185 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 DEPDC1Q5TB30 811 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 SLC44A2Q8IWA5 706 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 HBS1LQ9Y450 684 aaKnown RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 NR5A2O00482 541 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 TPST1O60507 370 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 CILPO75339 1184 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 FGF18O76093 207 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 USP1O94782 785 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 IMPDH2P12268 514 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 HOXB8P17481 243 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 TACR2P21452 398 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 RRM2P31350 389 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 VHLP40337 213 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 GUCA1AP43080 201 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 RPL21P46778 160 aaKnown RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 PEX5P50542 639 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 LCLAT1Q6UWP7 414 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 PLD4Q96BZ4 506 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 SLC40A1Q9NP59 571 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 EXOSC4Q9NPD3 245 aaKnown RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 ANKRD6Q9Y2G4 727 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 WDR47O94967 919 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 F2P00734 622 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 PECAM1P16284 738 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 CTPS1P17812 591 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 WARSP23381 471 aaKnown RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 NEK2P51955 445 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 N4BP2L1Q5TBK1 243 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 CAMKK1Q8N5S9 505 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 GFM2Q969S9 779 aaKnown RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 PCED1BQ96HM7 432 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 TAGLN3Q9UI15 199 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 HAO1Q9UJM8 370 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 TMCC3Q9ULS5 477 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 TMEM114B3SHH9 223 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 CSF2RAP15509 400 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 CALB2P22676 271 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 HSPA14Q0VDF9 509 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 NAB1Q13506 487 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 NR6A1Q15406 480 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 PAGE2BQ5JRK9 111 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 LRRC55Q6ZSA7 311 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 TNFRSF25Q93038 417 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 CCT7Q99832 543 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 BPIFA1Q9NP55 256 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 STXBP5LQ9Y2K9 1186 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 UBDO15205 165 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 ACSL4O60488 711 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 FSBPO95073 299 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 SLC25A14O95258 325 aaPredicted RBP11.42□□□□□ -0.58
PTPRK-221ENST00000532331 H2AFXP16104 143 aaPredicted RBP11.42□□□□□ -0.58
PTPRK-221ENST00000532331 TLR10Q9BXR5 811 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 FZD8Q9H461 694 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 ARL15Q9NXU5 204 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 SIK3Q9Y2K2 1263 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 A0A1W2PRU2 124 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 GSAPA4D1B5 854 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 E9PBE3 544 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 AP5Z1O43299 807 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 KLHL41O60662 606 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 EIF2S1P05198 315 aaKnown RBP11.42□□□□□ -0.58
PTPRK-221ENST00000532331 ALPPL2P10696 532 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 GOT1P17174 413 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 DGKEP52429 567 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 MAD2L1Q13257 205 aaPredicted RBP11.42□□□□□ -0.58
PTPRK-221ENST00000532331 AFTPHQ6ULP2 937 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 CYP4Z1Q86W10 505 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 SCUBE1Q8IWY4 988 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 FBXO39Q8N4B4 442 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 ZSWIM2Q8NEG5 633 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 POF1BQ8WVV4 589 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 MYO19Q96H55 970 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 LHX5Q9H2C1 402 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 NRDE2Q9H7Z3 1164 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 ZNF229Q9UJW7 825 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 A0A0A0MRY4 1105 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 USP12O75317 370 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 ERCC2P18074 760 aa11.42□□□□□ -0.58
PTPRK-221ENST00000532331 PRKCIP41743 596 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms